RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 A0A1W2PQM1 296 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 TMEM250H0YL14 139 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 MPC2O95563 127 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 ATP5G2Q06055 141 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 KLF9Q13886 244 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 ZBTB44Q8NCP5 570 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 EEF1AKMT3Q96AZ1 226 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 LPAR5Q9H1C0 372 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 PRSS50Q9UI38 385 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 NPFFO15130 113 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 FCMRO60667 390 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 CLEC2LP0C7M8 214 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 ASIPP42127 132 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 RPL34P49207 117 aaKnown RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 MRPL58Q14197 206 aaKnown RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 PLPPR5Q32ZL2 321 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 MEIG1Q5JSS6 88 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 DYNLT3P51808 116 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 HLA-DQA1P01909 254 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 DLX6P56179 175 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 DTX1Q86Y01 620 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 NPVFQ9HCQ7 196 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 RNASE1P07998 156 aaKnown RBP6.53□□□□□ -1.36
SYNE2-205ENST00000394768 SLC23A3Q6PIS1 610 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 RFLNAQ6ZTI6 216 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 LILRA3Q8N6C8 439 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-205ENST00000394768 BEND2Q8NDZ0 799 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 WFDC5Q8TCV5 224 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 ABHD14BQ96IU4 210 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 DDA1Q9BW61 102 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 PRR33A8MZF0 331 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 TNRC6CQ9HCJ0 1690 aaKnown RBP6.53□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF688P0C7X2 276 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 ATP5J2P56134 94 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 GFRA1P56159 465 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 LINC00303Q3SY05 128 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 DCAF10Q5QP82 559 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 MAMSTRQ6ZN01 415 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 CCL4L1Q8NHW4 92 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 SFXN3Q9BWM7 321 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 MFAP4P55083 255 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF841Q6ZN19 808 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 PRDM7Q9NQW5 492 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 MYOFQ9NZM1 2061 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 PYCARD-AS1I3L0S3 204 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 PMCHL1Q16048 86 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 WDR38Q5JTN6 314 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 COL5A1-AS1Q5SY13 56 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 DNM1P46Q6ZS02 220 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 GPA33Q99795 319 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 SYT11Q9BT88 431 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 PRR14Q9BWN1 585 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 HSPB7Q9UBY9 170 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 ZMIZ1Q9ULJ6 1067 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 IGLV3-25P01717 112 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 SBK3P0C264 359 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 ASAH2BP0C7U1 165 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 RPL8P62917 257 aaKnown RBP6.53□□□□□ -1.36
SYNE2-205ENST00000394768 TMEM190Q8WZ59 177 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 WDFY2Q96P53 400 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 RASL10BQ96S79 203 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-205ENST00000394768 NKG7Q16617 165 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 OR8B12Q8NGG6 310 aa6.53□□□□□ -1.36
SYNE2-205ENST00000394768 CNRIP1Q96F85 164 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-205ENST00000394768 ISG20L2Q9H9L3 353 aaKnown RBP6.53□□□□□ -1.36
SYNE2-205ENST00000394768 AKR7A2O43488 359 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 PPYP01298 95 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 CSN3P07498 182 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 LHFPL5Q8TAF8 219 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 DYRK2Q92630 601 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 PMCHL2Q9BQD1 86 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 IGKV3-7A0A075B6H7 116 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 CEACAM18A8MTB9 384 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 CA2P00918 260 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 WDFY1Q8IWB7 410 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 OR10AC1Q8NH08 325 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 OR2H1Q9GZK4 316 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 DOCK5Q9H7D0 1870 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 IGHV1OR15-9A0A0B4J2B8 117 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 PEMTQ9UBM1 199 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 KLK11Q9UBX7 282 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 RNF115Q9Y4L5 304 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 TP53BP1Q12888 1972 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-205ENST00000394768 hCG_38984A0A1B0GV85 526 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 CSF2RBP32927 897 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 NUBP1P53384 320 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 ISXQ2M1V0 245 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 TMEM255AQ5JRV8 349 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 PQLC2Q6ZP29 291 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 ELOVL5Q9NYP7 299 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 PITX3O75364 302 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 SUMO2P61956 95 aaKnown RBP6.52□□□□□ -1.37
SYNE2-205ENST00000394768 PPP1R1AQ13522 171 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 PGPEP1Q9NXJ5 209 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 HCSTQ9UBK5 93 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 SNURFLB1AK76 121 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 CTDSPLO15194 276 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 RPL27AP46776 148 aaKnown RBP6.52□□□□□ -1.37
SYNE2-205ENST00000394768 FAM159AQ6UWV7 190 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms