RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SRD5A3Q9H8P0 318 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 NGBQ9NPG2 151 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 GLRX2Q9NS18 164 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 OR6C3Q9NZP0 311 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 KCNS2Q9ULS6 477 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 U3KQA8 63 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 OR4C45A6NMZ5 311 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 CLPSP04118 112 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 IRF2P14316 349 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 ZNF32P17041 273 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 USF1P22415 310 aaPredicted RBP4.94□□□□□ -1.62
RFFL-202ENST00000394597 OPRM1P35372 400 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 IL13RA2Q14627 380 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 MSMO1Q15800 293 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 SPATA45Q537H7 98 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 HIKESHIQ53FT3 197 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 DNLZQ5SXM8 178 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 LDLRAD2Q5SZI1 272 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 C1orf185Q5T7R7 199 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 CLEC2AQ6UVW9 174 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 ARHGEF39Q8N4T4 335 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 TMEM251Q8N6I4 163 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 BMPERQ8N8U9 685 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 BCL2L2Q92843 193 aaPredicted RBP4.94□□□□□ -1.62
RFFL-202ENST00000394597 GCM1Q9NP62 436 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 NECAP2Q9NVZ3 263 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 ZFP30Q9Y2G7 519 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 WIPI2Q9Y4P8 454 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 GPR179Q6PRD1 2367 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 CHD3Q12873 2000 aaKnown RBP4.94□□□□□ -1.62
RFFL-202ENST00000394597 CDX4O14627 284 aaPredicted RBP4.94□□□□□ -1.62
RFFL-202ENST00000394597 HMGB3O15347 200 aaKnown RBP4.94□□□□□ -1.62
RFFL-202ENST00000394597 NRASP01111 189 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 OR8G2PQ6IF36 304 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 UNQ9370/PRO34162Q6UXP9 181 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 TUSC5Q8IXB3 177 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 SLC24A4Q8NFF2 622 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 OR4X1Q8NH49 305 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 RPS4Y2Q8TD47 263 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 PP6455Q8WZ26 134 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 NINJ1Q92982 152 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 ZNF385AQ96PM9 386 aaKnown RBP4.94□□□□□ -1.62
RFFL-202ENST00000394597 MESP1Q9BRJ9 268 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 CNTD2Q9H8S5 307 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 LPAR2Q9HBW0 351 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 A0A087WWC5 75 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 M0R1X1 148 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 FCN1O00602 326 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 ITGB1BP1O14713 200 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 TIMM8AO60220 97 aaPredicted RBP4.94□□□□□ -1.62
RFFL-202ENST00000394597 ZNF737O75373 536 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 OR4A8P0C604 315 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 TNFSF4P23510 183 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 PCK2Q16822 640 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 CDCP2Q5VXM1 449 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 KCNK17Q96T54 332 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 SH3BGRL3Q9H299 93 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 KCNIP1Q9NZI2 227 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 WASHC3Q9Y3C0 194 aa4.94□□□□□ -1.62
RFFL-202ENST00000394597 NPIPB13A6NJU9 1138 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 NPIPB4C9JG80 1138 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 C9JQL5 133 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 SELEP16581 610 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 PAFAH1B2P68402 229 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 DMRTC1Q5HYR2 192 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 C10orf91Q5T1B1 145 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 ATP1A1-AS1Q5TC04 95 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 AADACL3Q5VUY0 350 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 STUMQ69YW2 141 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 PPP1R35Q8TAP8 253 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 ZNF519Q8TB69 540 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 ABHD3Q8WU67 409 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 RNF133Q8WVZ7 376 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 UHRF2Q96PU4 802 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 RNF126Q9BV68 326 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 RTN4RQ9BZR6 473 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 ACTR3CQ9C0K3 210 aaPredicted RBP4.93□□□□□ -1.62
RFFL-202ENST00000394597 EGLN1Q9GZT9 426 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 ZNF391Q9UJN7 358 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 CLDN16Q9Y5I7 305 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 DENND4AQ7Z401 1863 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 ZNF106Q9H2Y7 1883 aaKnown RBP4.93□□□□□ -1.62
RFFL-202ENST00000394597 IGLV1-36A0A0B4J1U3 117 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 A0A1B0GV72 72 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 OR7C1O76099 320 aaPredicted RBP4.93□□□□□ -1.62
RFFL-202ENST00000394597 IGHMP01871 453 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 FAM157CP0CG43 387 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 PMP22Q01453 160 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 BAXQ07812 192 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 IL24Q13007 206 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 C3AR1Q16581 482 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 SLC25A53Q5H9E4 307 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 GFRALQ6UXV0 394 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 LHFPL2Q6ZUX7 228 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 CATSPERDQ86XM0 798 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 FADS6Q8N9I5 356 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 OR52N4Q8NGI2 321 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 OR1L6Q8NGR2 347 aa4.93□□□□□ -1.62
RFFL-202ENST00000394597 APOBEC3DQ96AK3 386 aaPredicted RBP4.93□□□□□ -1.62
RFFL-202ENST00000394597 ARHGAP5-AS1Q96IT6 56 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms