RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 PHB2Q99623 299 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 SLC5A7Q9GZV3 580 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 NDUFB7P17568 137 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 GNMTQ14749 295 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 ZNF818PQ6ZRF7 136 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 SGPP2Q8IWX5 399 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 RTN4IP1Q8WWV3 396 aaPredicted RBP16.82■□□□□ 0.28
HDDC3-202ENST00000394272 DMRTB1Q96MA1 342 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 ZNF436Q9C0F3 470 aaPredicted RBP16.82■□□□□ 0.28
HDDC3-202ENST00000394272 CALYQ9NYX4 217 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 DBX1A6NMT0 343 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 OVOL3O00110 214 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 F2RL2O00254 374 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 NDUFB3O43676 98 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 RND3P61587 244 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 SLC9A3R2Q15599 337 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 C17orf58Q2M2W7 97 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 LRRC10Q5BKY1 277 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 FAM53AQ6NSI3 398 aaPredicted RBP16.81■□□□□ 0.28
HDDC3-202ENST00000394272 NAA60Q9H7X0 242 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 OR2S2Q9NQN1 319 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 CCL28Q9NRJ3 127 aa16.81■□□□□ 0.28
HDDC3-202ENST00000394272 TRGV10A0A0A0MS01 117 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 A0A0B4J2A0 478 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 GPR31O00270 319 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 DVL1O14640 695 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 SLC22A5O76082 557 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 LUMP51884 338 aaPredicted RBP16.8■□□□□ 0.28
HDDC3-202ENST00000394272 FAM185AQ8N0U4 392 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 GALNT14Q96FL9 552 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 LINC00574Q9H8X3 128 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 CHODLQ9H9P2 273 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 SHPKQ9UHJ6 478 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 TEX13DA0A0J9YY54 714 aaPredicted RBP16.8■□□□□ 0.28
HDDC3-202ENST00000394272 GOSR2O14653 212 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 OR2A4O95047 310 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 F12P00748 615 aaPredicted RBP16.8■□□□□ 0.28
HDDC3-202ENST00000394272 IGLV2-14P01704 120 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 MEF2CQ06413 473 aaPredicted RBP16.8■□□□□ 0.28
HDDC3-202ENST00000394272 ANKRD55Q3KP44 614 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 LIN54Q6MZP7 749 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 CCDC71LQ8N9Z2 235 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 OR2A7Q96R45 310 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 PIPOXQ9P0Z9 390 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 JPT1Q9UK76 154 aa16.8■□□□□ 0.28
HDDC3-202ENST00000394272 YLPM1P49750 1951 aaKnown RBP16.79■□□□□ 0.28
HDDC3-202ENST00000394272 UTP20O75691 2785 aaKnown RBP16.79■□□□□ 0.28
HDDC3-202ENST00000394272 KBTBD11-OT1A0A1B0GTJ5 212 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 hADV38S2A0JD32 116 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 HSD17B6O14756 317 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 NDUFS7O75251 213 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 IFNA2P01563 188 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 HLA-GP17693 338 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 PPP1CCP36873 323 aaKnown RBP16.79■□□□□ 0.28
HDDC3-202ENST00000394272 EIF2B2P49770 351 aaKnown RBP16.79■□□□□ 0.28
HDDC3-202ENST00000394272 H2BFSP57053 126 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 LOXL3P58215 753 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 LY6G6FQ5SQ64 297 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 AVPI1Q5T686 147 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 BVESQ8NE79 360 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 NINJ1Q92982 152 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 C19orf12Q9NSK7 152 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 PRR13Q9NZ81 148 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 CLN8Q9UBY8 286 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 LINC00312Q9Y6C7 94 aa16.79■□□□□ 0.28
HDDC3-202ENST00000394272 IGHV3-43A0A0B4J1X8 118 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 ZNF729A6NN14 1252 aaPredicted RBP16.78■□□□□ 0.28
HDDC3-202ENST00000394272 IGHV3-43DP0DP04 118 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 EFNA4P52798 201 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 NLRC3Q7RTR2 1065 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 RAB9BQ9NP90 201 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 UBE2J1Q9Y385 318 aaPredicted RBP16.78■□□□□ 0.28
HDDC3-202ENST00000394272 MALRD1Q5VYJ5 2156 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 MPPED1O15442 326 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 SIX6O95475 246 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 GIPP09681 153 aaPredicted RBP16.78■□□□□ 0.28
HDDC3-202ENST00000394272 OR8U9P0C7N5 309 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 TMEM33P57088 247 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 RPL31P62899 125 aaKnown RBP16.78■□□□□ 0.28
HDDC3-202ENST00000394272 ZFP69Q49AA0 526 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 TMEM155Q4W5P6 130 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 DCAF12L2Q5VW00 463 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 OR5M8Q8NGP6 311 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 OR8U1Q8NH10 309 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 COQ8AQ8NI60 647 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 RAB1CQ92928 201 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 TIMD4Q96H15 378 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 KCNIP3Q9Y2W7 256 aa16.78■□□□□ 0.28
HDDC3-202ENST00000394272 A1L4Q6 167 aa16.77■□□□□ 0.27
HDDC3-202ENST00000394272 PPIHO43447 177 aaKnown RBP16.77■□□□□ 0.27
HDDC3-202ENST00000394272 OR5AC1P0C628 307 aa16.77■□□□□ 0.27
HDDC3-202ENST00000394272 OMGP23515 440 aa16.77■□□□□ 0.27
HDDC3-202ENST00000394272 ZNF273Q14593 569 aa16.77■□□□□ 0.27
HDDC3-202ENST00000394272 SP5Q6BEB4 398 aaPredicted RBP16.77■□□□□ 0.27
HDDC3-202ENST00000394272 C11orf88Q6PI97 169 aa16.77■□□□□ 0.27
HDDC3-202ENST00000394272 ZNF841Q6ZN19 808 aa16.77■□□□□ 0.27
HDDC3-202ENST00000394272 KCTD9Q7L273 389 aa16.77■□□□□ 0.27
HDDC3-202ENST00000394272 CMTM1Q8IZ96 169 aa16.77■□□□□ 0.27
HDDC3-202ENST00000394272 TAS2R3Q9NYW6 316 aa16.77■□□□□ 0.27
HDDC3-202ENST00000394272 SMLR1H3BR10 107 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms