RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 CLDN15P56746 228 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 RAC1P63000 192 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 TMEM187Q14656 261 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 CXorf66Q5JRM2 361 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-204ENST00000394164 CRIP3Q6Q6R5 217 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 C11orf42Q8N5U0 333 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 PIGCQ92535 297 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 RPUSD4Q96CM3 377 aaKnown RBP8.55□□□□□ -1.04
PSEN1-204ENST00000394164 WNT5BQ9H1J7 359 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 VSIRQ9H7M9 311 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 NAA60Q9H7X0 242 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 DNAJC4Q9NNZ3 241 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 IGHV3-64DA0A0J9YX35 117 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 HPRT1P00492 218 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 CTSDP07339 412 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-204ENST00000394164 FOXG1P55316 489 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-204ENST00000394164 IGFBP7Q16270 282 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 TOMM20LQ6UXN7 152 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 TMEM256Q8N2U0 113 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 SPTSSAQ969W0 71 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 PARD6AQ9NPB6 346 aa8.55□□□□□ -1.04
PSEN1-204ENST00000394164 AURKAIP1Q9NWT8 199 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-204ENST00000394164 IGKV1-27A0A075B6S5 117 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 HSPA12AO43301 675 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 METTL15P1P0C7V9 234 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 DUSP3P51452 185 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-204ENST00000394164 ZNF266Q14584 549 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 Q6ZVH6 145 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 WDR5BQ86VZ2 330 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 ADPRHL1Q8NDY3 354 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 RSG1Q9BU20 258 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 FOXJ2Q9P0K8 574 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 NAGKQ9UJ70 344 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 DIDO1Q9BTC0 2240 aaKnown RBP8.54□□□□□ -1.04
PSEN1-204ENST00000394164 LOC102723971A0A1B0GUV8 181 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 AQP7O14520 342 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 NUPR1O60356 82 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 OPN1MWP04001 364 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 OPN1MW2P0DN77 364 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 OPN1MW3P0DN78 364 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 GALR1P47211 349 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 CYB561P49447 251 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 ZNF100Q8IYN0 542 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 TMEM54Q969K7 222 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 ANAPC10Q9UM13 185 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 B3GALT5-AS1P59052 145 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 ZXDAP98168 799 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 PSG4Q00888 419 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 TESK1Q15569 626 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 ATP1A1-AS1Q5TC04 95 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 C6orf15Q6UXA7 325 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-204ENST00000394164 GGNQ86UU5 652 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 ZNF573Q86YE8 665 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 CPEB3Q8NE35 698 aaKnown RBP8.54□□□□□ -1.04
PSEN1-204ENST00000394164 SIGLEC12Q96PQ1 595 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 SRD5A3Q9H8P0 318 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 MSL2Q9HCI7 577 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 SLC2A9Q9NRM0 540 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 V9GYS6 101 aa8.54□□□□□ -1.04
PSEN1-204ENST00000394164 PCNX2A6NKB5 2137 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 TRBV24-1A0A075B6N3 115 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 LRRC3CA6NJW4 275 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 PROB1E7EW31 1015 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 MSTNO14793 375 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 CD82P27701 267 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 BRS3P32247 399 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 RND2P52198 227 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 RAC3P60763 192 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 ZNF92Q03936 586 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 TLE4Q04727 773 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 IL13RA2Q14627 380 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 C1orf194Q5T5A4 169 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 OR1F12Q8NHA8 337 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 TP53RKQ96S44 253 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 SMIM7Q9BQ49 75 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 SMDT1Q9H4I9 107 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 SDF2L1Q9HCN8 221 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 MGAQ8IWI9 3026 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 DOCK11Q5JSL3 2073 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 ICE1Q9Y2F5 2266 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 VAMP5O95183 116 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 FAM3BP58499 235 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-204ENST00000394164 TMEM267Q0VDI3 215 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-204ENST00000394164 KCNMB1Q16558 191 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 ABLIM2Q6H8Q1 611 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 SSX7Q7RTT5 188 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 TMEM252Q8N6L7 170 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 BORCS8Q96FH0 119 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 MS4A10Q96PG2 267 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 FOXB1Q99853 325 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 DCHS1Q96JQ0 3298 aa8.53□□□□□ -1.04
PSEN1-204ENST00000394164 TMEM210A6NLX4 147 aa8.52□□□□□ -1.05
PSEN1-204ENST00000394164 TDGF1P13385 188 aa8.52□□□□□ -1.05
PSEN1-204ENST00000394164 NKX2-1P43699 371 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-204ENST00000394164 SPIN3Q5JUX0 258 aa8.52□□□□□ -1.05
PSEN1-204ENST00000394164 C10orf128Q5T292 105 aa8.52□□□□□ -1.05
PSEN1-204ENST00000394164 FAM27BQ5VT28 67 aa8.52□□□□□ -1.05
PSEN1-204ENST00000394164 PLCXD3Q63HM9 321 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms