RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 OR3A1P47881 315 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 DEFA5Q01523 94 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 ZNF273Q14593 569 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 SWI5Q1ZZU3 235 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 Q6ZRG5 221 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 SVBPQ8N300 66 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 DRAM1Q8N682 238 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 OR8U1Q8NH10 309 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 MUCL1Q96DR8 90 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 COQ2Q96H96 371 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 LURAP1Q96LR2 239 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 LUZP4Q9P127 313 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 PPP1R3CQ9UQK1 317 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 RBM7Q9Y580 266 aaKnown RBP12.01□□□□□ -0.49
MKS1-203ENST00000393120 URB1O60287 2271 aaKnown RBP12□□□□□ -0.49
MKS1-203ENST00000393120 CHST1O43916 411 aa12□□□□□ -0.49
MKS1-203ENST00000393120 TMEM50AO95807 157 aa12□□□□□ -0.49
MKS1-203ENST00000393120 IGKV1-39P01597 117 aa12□□□□□ -0.49
MKS1-203ENST00000393120 CRYAAP02489 173 aa12□□□□□ -0.49
MKS1-203ENST00000393120 IGKV1D-39P04432 117 aa12□□□□□ -0.49
MKS1-203ENST00000393120 CD5P06127 495 aa12□□□□□ -0.49
MKS1-203ENST00000393120 ZNF83P51522 516 aa12□□□□□ -0.49
MKS1-203ENST00000393120 NKX6-1P78426 367 aaPredicted RBP12□□□□□ -0.49
MKS1-203ENST00000393120 AESQ08117 197 aa12□□□□□ -0.49
MKS1-203ENST00000393120 ZNF585BQ52M93 769 aa12□□□□□ -0.49
MKS1-203ENST00000393120 RPRMLQ8N4K4 120 aa12□□□□□ -0.49
MKS1-203ENST00000393120 SREK1IP1Q8N9Q2 155 aaPredicted RBP12□□□□□ -0.49
MKS1-203ENST00000393120 OR1L1Q8NH94 360 aa12□□□□□ -0.49
MKS1-203ENST00000393120 RAB40CQ96S21 281 aa12□□□□□ -0.49
MKS1-203ENST00000393120 TSNAXQ99598 290 aaKnown RBP12□□□□□ -0.49
MKS1-203ENST00000393120 SEC11CQ9BY50 192 aa12□□□□□ -0.49
MKS1-203ENST00000393120 MAGT1Q9H0U3 335 aa12□□□□□ -0.49
MKS1-203ENST00000393120 UFSP2Q9NUQ7 469 aa12□□□□□ -0.49
MKS1-203ENST00000393120 CACFD1Q9UGQ2 172 aa12□□□□□ -0.49
MKS1-203ENST00000393120 CNOT1A5YKK6 2376 aaKnown RBP12□□□□□ -0.49
MKS1-203ENST00000393120 A0A0G2JRQ6 117 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 SRRM5B3KS81 715 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 RNASEK-C17orf49H0YIS7 233 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 TRIM77I1YAP6 450 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 WRBO00258 174 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 HBZP02008 142 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 ADCYAP1P18509 176 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 IL2RGP31785 369 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 AKR1C2P52895 323 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 PAX9P55771 341 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 COL10A1Q03692 680 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 AKR1C1Q04828 323 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 MSMPQ1L6U9 139 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 TRAT1Q6PIZ9 186 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 ODF3L1Q8IXM7 274 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 ZNF645Q8N7E2 425 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 OR2Z1Q8NG97 314 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 LRRC29Q8WV35 223 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 LRFN3Q9BTN0 628 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 PARP12Q9H0J9 701 aaKnown RBP11.99□□□□□ -0.49
MKS1-203ENST00000393120 TREM1Q9NP99 234 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 M0R1B8 84 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 MUC1P15941 1255 aaPredicted RBP11.99□□□□□ -0.49
MKS1-203ENST00000393120 EIF4EBP1Q13541 118 aaPredicted RBP11.99□□□□□ -0.49
MKS1-203ENST00000393120 FAM180AQ6UWF9 173 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 NKX6-2Q9C056 277 aaPredicted RBP11.99□□□□□ -0.49
MKS1-203ENST00000393120 KCNS2Q9ULS6 477 aa11.99□□□□□ -0.49
MKS1-203ENST00000393120 IGLV3-9A0A075B6K5 115 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 LOC105371267A0A1B0GV96 52 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 A8MXE2 369 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 F8W036 122 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 DNASE2O00115 360 aaPredicted RBP11.98□□□□□ -0.49
MKS1-203ENST00000393120 IGKV1-5P01602 117 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 PRDX2P32119 198 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 DVL1P1P54792 670 aaPredicted RBP11.98□□□□□ -0.49
MKS1-203ENST00000393120 KRBOX4Q5JUW0 171 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 Q6ZRM9 215 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 CD177Q8N6Q3 437 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 TCTEX1D1Q8N7M0 179 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 COA4Q9NYJ1 87 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 WSB1Q9Y6I7 421 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 UMAD1C9J7I0 102 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 SIGLEC5O15389 551 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 ZNF737O75373 536 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 GABRA2P47869 451 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 KLF3P57682 345 aaPredicted RBP11.98□□□□□ -0.49
MKS1-203ENST00000393120 RPL23AP62750 156 aaKnown RBP11.98□□□□□ -0.49
MKS1-203ENST00000393120 HTD2P86397 168 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 CR1LQ2VPA4 569 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 LRP11Q86VZ4 500 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 HSD17B11Q8NBQ5 300 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 UBALD1Q8TB05 177 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 FAM216AQ8WUB2 273 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 TMEM171Q8WVE6 324 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 DUSP13Q9UII6 198 aa11.98□□□□□ -0.49
MKS1-203ENST00000393120 CELSR3Q9NYQ7 3312 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 ARID1AO14497 2285 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 TXNL1O43396 289 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 TSPAN15O95858 294 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 GLIPR1P48060 266 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 ARHGDIBP52566 201 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 TAS2R30P59541 319 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 RPS23P62266 143 aaKnown RBP11.97□□□□□ -0.49
MKS1-203ENST00000393120 OR52L2PQ8NGH6 319 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 OR5C1Q8NGR4 320 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms