RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 TRAPPC2LH3BP13 241 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 SYNGR2O43760 224 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 CYTIPO60759 359 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 CBR3O75828 277 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 NGFP01138 241 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 IGKV1D-33P01593 117 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 IGKV1-33P01594 117 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 BMP5P22003 454 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 FGF12P61328 243 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 SRYQ05066 204 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 PNRC1Q12796 327 aaPredicted RBP11.9□□□□□ -0.5
CCDC57-203ENST00000392343 Q3ZCU0 254 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 TGIF2LXQ8IUE1 241 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 TMEM183AQ8IXX5 376 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 OR10J5Q8NHC4 309 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 LHX4Q969G2 390 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 ATG101Q9BSB4 218 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 ZNF552Q9H707 407 aaPredicted RBP11.9□□□□□ -0.5
CCDC57-203ENST00000392343 AURKAIP1Q9NWT8 199 aaPredicted RBP11.9□□□□□ -0.5
CCDC57-203ENST00000392343 VAX2Q9UIW0 290 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 TRBV24-1A0A075B6N3 115 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 TRAV1-1A0A0B4J248 108 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 CD300LBA8K4G0 201 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 ST8SIA5O15466 376 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 IFNA10P01566 189 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 OPN1MWP04001 364 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 MMP7P09237 267 aaPredicted RBP11.9□□□□□ -0.5
CCDC57-203ENST00000392343 OPN1MW2P0DN77 364 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 OPN1MW3P0DN78 364 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 TAS2R60P59551 318 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 CD81P60033 236 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 SSX2Q16385 188 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 DPPA3Q6W0C5 159 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 GGNQ86UU5 652 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 ABHD14BQ96IU4 210 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 PRRG4Q9BZD6 226 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 SLC25A22Q9H936 323 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 CDH20Q9HBT6 801 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 SLC39A9Q9NUM3 307 aa11.9□□□□□ -0.5
CCDC57-203ENST00000392343 LRRC3CA6NJW4 275 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 LILRA1O75019 489 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 COX6A1P12074 109 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 IGFBP4P22692 258 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 CLDN15P56746 228 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 B3GALT5-AS1P59052 145 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 OR1P1Q8NH06 330 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 MRPL30Q8TCC3 161 aaKnown RBP11.89□□□□□ -0.51
CCDC57-203ENST00000392343 CLDN23Q96B33 292 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 PRSS50Q9UI38 385 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 KCNS2Q9ULS6 477 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 KIR2DS1A0A191URI9 304 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 IGKV1-5P01602 117 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 KIR2DS4P43632 304 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 KIR2DS1Q14954 304 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
CCDC57-203ENST00000392343 KRTAP27-1Q3LI81 207 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 TRIM61Q5EBN2 209 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 RPP25LQ8N5L8 163 aaKnown RBP11.89□□□□□ -0.51
CCDC57-203ENST00000392343 OR10G4Q8NGN3 311 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 IMMP1LQ96LU5 166 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 TMEM242Q9NWH2 141 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 OR2W1Q9Y3N9 320 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 DNAJC13O75165 2243 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 WDR1O75083 606 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 SRFP11831 508 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 CCL4P13236 92 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 IDH3GP51553 393 aaPredicted RBP11.89□□□□□ -0.51
CCDC57-203ENST00000392343 OR8G1Q15617 311 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 RAB30Q15771 203 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 ZNF324BQ6AW86 544 aaPredicted RBP11.89□□□□□ -0.51
CCDC57-203ENST00000392343 MKXQ8IYA7 352 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 PSMF1Q92530 271 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 RAB40CQ96S21 281 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 SF3B5Q9BWJ5 86 aaKnown RBP11.89□□□□□ -0.51
CCDC57-203ENST00000392343 FUT9Q9Y231 359 aa11.89□□□□□ -0.51
CCDC57-203ENST00000392343 DUXBA0A1W2PPF3 345 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 ZNF503-AS2A6NEH8 195 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 A8MWP6 167 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 PFN1P07737 140 aaKnown RBP11.88□□□□□ -0.51
CCDC57-203ENST00000392343 FOSL1P15407 271 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 GALR1P47211 349 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 TMEM241Q24JQ0 296 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 MRPL21Q7Z2W9 205 aaKnown RBP11.88□□□□□ -0.51
CCDC57-203ENST00000392343 MRGPRGQ86SM5 289 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 MBD3L1Q8WWY6 194 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 THOC3Q96J01 351 aaKnown RBP11.88□□□□□ -0.51
CCDC57-203ENST00000392343 C1QTNF5Q9BXJ0 243 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 WASF3Q9UPY6 502 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 LY6G6EA0A0G2JKS1 128 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 TOX3O15405 576 aaPredicted RBP11.88□□□□□ -0.51
CCDC57-203ENST00000392343 LRRC75BQ2VPJ9 315 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 BSXQ3C1V8 233 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 SRD5A3Q9H8P0 318 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 U3KQA8 63 aa11.88□□□□□ -0.51
CCDC57-203ENST00000392343 USF3Q68DE3 2245 aa11.87□□□□□ -0.51
CCDC57-203ENST00000392343 GTF3C1Q12789 2109 aa11.87□□□□□ -0.51
CCDC57-203ENST00000392343 FGF7P21781 194 aa11.87□□□□□ -0.51
CCDC57-203ENST00000392343 PCBD1P61457 104 aa11.87□□□□□ -0.51
CCDC57-203ENST00000392343 RPL23P62829 140 aaKnown RBP11.87□□□□□ -0.51
CCDC57-203ENST00000392343 GNB2P62879 340 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms