RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 RPS9P46781 194 aaKnown RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 RPL14P50914 215 aaKnown RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 RAB5CP51148 216 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 UBE2G2P60604 165 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 RRAS2P62070 204 aaPredicted RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 LSM6P62312 80 aaKnown RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 RHOGP84095 191 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 CAV1Q03135 178 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 ERCC8Q13216 396 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 TRAM1Q15629 374 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM241Q24JQ0 296 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 SLC36A2Q495M3 483 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 HIKESHIQ53FT3 197 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 PYCR3Q53H96 274 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 LPCAT4Q643R3 524 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM42Q69YG0 159 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 ADNP2Q6IQ32 1131 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 DNAJC24Q6P3W2 148 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 MRPL21Q7Z2W9 205 aaKnown RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 CALHM1Q8IU99 346 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 BAP18Q8IXM2 172 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 KATNAL2Q8IYT4 538 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 PGAM4Q8N0Y7 254 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 SVBPQ8N300 66 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM156Q8N614 296 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 METTL13Q8N6R0 699 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 YIPF7Q8N8F6 280 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 PXT1Q8NFP0 134 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 OR11H1Q8NG94 326 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 OR5L1Q8NGL2 311 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 OR13C8Q8NGS7 320 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 OR11H2Q8NH07 326 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 OR10A6Q8NH74 314 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 OR5K2Q8NHB8 316 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 CD200R1Q8TD46 325 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 ORAOV1Q8WV07 137 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 CACNG8Q8WXS5 425 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM234Q8WY98 164 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 CMTM5Q96DZ9 223 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 YIPF6Q96EC8 236 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 MRPS24Q96EL2 167 aaKnown RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 GALNT14Q96FL9 552 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 PYURFQ96I23 114 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 MICU1Q9BPX6 476 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 ACTR3CQ9C0K3 210 aaPredicted RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 IL22Q9GZX6 179 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 NAA50Q9GZZ1 169 aaKnown RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 BOLA2Q9H3K6 86 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 DHX35Q9H5Z1 703 aaKnown RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 PATZ1Q9HBE1 687 aaKnown RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 RETNQ9HD89 108 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 ABCB9Q9NP78 766 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 SPANXA1Q9NS26 97 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 DUX4Q9UBX2 424 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 CLN8Q9UBY8 286 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 SLC7A11Q9UPY5 501 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 V9GYH0 126 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 PIKFYVEQ9Y2I7 2098 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 PLIN4Q96Q06 1357 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 BCORQ6W2J9 1755 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 KIDINS220Q9ULH0 1771 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 DLEC1Q9Y238 1755 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 CHD5Q8TDI0 1954 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 NRXN2Q9P2S2 1712 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 KCNE1BA0A087WTH5 132 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM269A0A1B0GVZ9 245 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 A0A1W2PP18 115 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 PRORSD1PA6NEY8 169 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 COLCA2A8K830 154 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 C9J4A7 227 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 SMKR1H3BMG3 65 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 C15orf65H3BRN8 121 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 TEX46H3BTG2 121 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 KLRC4O43908 158 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 OR2J2O76002 312 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 MPC2O95563 127 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 TTC4O95801 387 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CST4P01036 141 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 MT-ND4LP03901 98 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 HLA-DPB1P04440 258 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ARG1P05089 322 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CRYBA1P05813 215 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 BCHEP06276 602 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 IFI30P13284 250 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 UCHL3P15374 230 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 GGT1P19440 569 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 PVALBP20472 110 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 FGF7P21781 194 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CRHBPP24387 322 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 IL12BP29460 328 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CSNK1A1P48729 337 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CDKN2DP55273 166 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CTBP2P56545 445 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 PPP3R1P63098 170 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 PRDX4Q13162 271 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 EBI3Q14213 229 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 OR4D1Q15615 310 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 PRSS8Q16651 343 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ATP6V1FQ16864 119 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 PLPPR5Q32ZL2 321 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms