RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 GEMIN2O14893 280 aaKnown RBP0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 FGF16O43320 207 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 GMDSO60547 372 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 DNAJB6O75190 326 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 PDCD6O75340 191 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 SNX4O95219 450 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 C1QCP02747 245 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 GIMD1P0DJR0 217 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 ESDP10768 282 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 LIPCP11150 499 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 CTSEP14091 401 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 GPX2P18283 190 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 M6PRP20645 277 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 EMP1P54849 157 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 CTAG1AP78358 180 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 BSPH1Q075Z2 132 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 PAFAH1B3Q15102 231 aaKnown RBP0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 CDK10Q15131 360 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 ELOBQ15370 118 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 RAB11BQ15907 218 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 TAL2Q16559 108 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 CEACAM16Q2WEN9 425 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 MRPL51Q4U2R6 128 aaKnown RBP0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 TMEM155Q4W5P6 130 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 LAMTOR1Q6IAA8 161 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 DGAT2L6Q6ZPD8 337 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 FAM43BQ6ZT52 329 aaPredicted RBP0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 FP248Q71RG6 208 aaPredicted RBP0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 DCXRQ7Z4W1 244 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 GAPTQ8N292 157 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 ARHGAP18Q8N392 663 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 PDCL2Q8N4E4 241 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 YIPF7Q8N8F6 280 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 OR8G5Q8NG78 346 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 OR4K17Q8NGC6 315 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 FNDC9Q8TBE3 224 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 SPACA4Q8TDM5 124 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 GLYATL2Q8WU03 294 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 SLC7A6Q92536 515 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 BIRC8Q96P09 236 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 UPK3BQ9BT76 320 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 MED18Q9BUE0 208 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 BEX2Q9BXY8 128 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 METTL17Q9H7H0 456 aaPredicted RBP0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 ACOT13Q9NPJ3 140 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 AHSPQ9NZD4 102 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 HHLA3Q9XRX5 114 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 MTCH2Q9Y6C9 303 aa0.09□□□□□ -2.4
SNORD28B-201ENST00000390993 POLEQ07864 2286 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 ARAP3Q8WWN8 1544 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 TRGV5A0A0B4J1U4 118 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 LOC100653049A0A140TA62 436 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 UBE2L6O14933 153 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 PLA2G10O15496 165 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 KRT34O76011 436 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 MT-CO2P00403 227 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 FGF4P08620 206 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 OR8G3PP0DMU2 310 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 SPNP16150 400 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 CRHBPP24387 322 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 TSPOP30536 169 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 RPA3P35244 121 aaPredicted RBP0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 UGT2B10P36537 528 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 RPS5P46782 204 aaKnown RBP0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 GNA12Q03113 381 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 SPAG1Q07617 926 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 DYNC1I2Q13409 638 aaKnown RBP0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 PDGFRLQ15198 375 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 SLC36A2Q495M3 483 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 SCGB1D4Q6XE38 83 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 CLEC20AQ6ZU45 233 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 OFCC1Q8IZS5 231 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 FAM19A2Q8N3H0 131 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 FBXO36Q8NEA4 188 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 OR6K2Q8NGY2 324 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 OR6N2Q8NGY6 317 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 ASB17Q8WXJ9 295 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 TFGQ92734 400 aaPredicted RBP0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 FAM131CQ96AQ9 280 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 COPS4Q9BT78 406 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 EBPLQ9BY08 206 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 VCX3BQ9H321 246 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 C11orf49Q9H6J7 331 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 ZMAT5Q9UDW3 170 aaKnown RBP0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 HHLA2Q9UM44 414 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 TBL2Q9Y4P3 447 aaKnown RBP0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 FAM215AQ9Y5M1 114 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 KIAA2026Q5HYC2 2103 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 ARFGEF3Q5TH69 2177 aa0.08□□□□□ -2.4
SNORD28B-201ENST00000390993 IGKV1-12A0A0C4DH73 117 aa0.07□□□□□ -2.4
SNORD28B-201ENST00000390993 LINC00862A6NCI5 91 aa0.07□□□□□ -2.4
SNORD28B-201ENST00000390993 HMSDA8MTL9 139 aa0.07□□□□□ -2.4
SNORD28B-201ENST00000390993 SLC17A3O00476 420 aa0.07□□□□□ -2.4
SNORD28B-201ENST00000390993 TXNDC9O14530 226 aa0.07□□□□□ -2.4
SNORD28B-201ENST00000390993 ENSAO43768 121 aaKnown RBP0.07□□□□□ -2.4
SNORD28B-201ENST00000390993 KLRC4O43908 158 aa0.07□□□□□ -2.4
SNORD28B-201ENST00000390993 ZNF737O75373 536 aa0.07□□□□□ -2.4
SNORD28B-201ENST00000390993 VAPBO95292 243 aa0.07□□□□□ -2.4
SNORD28B-201ENST00000390993 PSMG1O95456 288 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms