RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CRYL1Q9Y2S2 319 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 FIS1Q9Y3D6 152 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 ZNF706Q9Y5V0 76 aaPredicted RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SBNO2Q9Y2G9 1366 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SOGA1O94964 1423 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 ACACBO00763 2458 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TSPOAP1O95153 1857 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 NUMA1Q14980 2115 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 LRBAP50851 2863 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 TRAV23DV6A0A075B6W5 121 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A0A6YYH2 397 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 TRAV12-1A0A0B4J245 112 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 TRAV22A0A0B4J277 110 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A0J9YW62 118 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A0U1RRA0 63 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 hCG_1807616A0A1W2PRN6 198 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 OR6C6A6NF89 314 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 URADA6NGE7 173 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 A6NJ64 397 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 OR11H12B2RN74 326 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 F5H768 121 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 H3BRM9 83 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SDHDO14521 159 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 GOSR2O14653 212 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 TOX3O15405 576 aaPredicted RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CLDN3O15551 220 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 RAD51CO43502 376 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PRKAB2O43741 272 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 NME6O75414 186 aaPredicted RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 UBL3O95164 117 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CLIC3O95833 236 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CATP04040 527 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 IL6P05231 212 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CTSDP07339 412 aaPredicted RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CD14P08571 375 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 LGALS1P09382 135 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 HSMCR30P0CW71 290 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CT45A6P0DMU7 189 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CT45A5P0DMU8 189 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CT45A7P0DMV0 189 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 DEFA4P12838 97 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 NPPCP23582 126 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CYP2F1P24903 491 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 HMGB2P26583 209 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 ATP6V0CP27449 155 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 LAP3P28838 519 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CASP1P29466 404 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SERPINB6P35237 376 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PPP1CCP36873 323 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PPICP45877 212 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SERPINB10P48595 397 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SERPINH1P50454 418 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 ACLYP53396 1101 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CLNS1AP54105 237 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 FXYD2P54710 66 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 NAPAP54920 295 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 AQP5P55064 265 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CLDN18P56856 261 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 TAS2R30P59541 319 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 KIAA1024LP59773 190 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 BPIFB3P59826 476 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 IGBP1P78318 339 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC35B1P78383 322 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 GTF2BQ00403 316 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 BSPH1Q075Z2 132 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SCN1BQ07699 218 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 LAMTOR4Q0VGL1 99 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 KLRB1Q12918 225 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 XRCC4Q13426 336 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PPP1R1AQ13522 171 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 GAMTQ14353 236 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 ANGPT1Q15389 498 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 USF2Q15853 346 aaPredicted RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 MIAQ16674 131 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 IMMTQ16891 758 aaKnown RBP-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CEACAM21Q3KPI0 293 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 KRTAP19-6Q3LI70 58 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 RILPL1Q5EBL4 403 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CT45A1Q5HYN5 189 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CLLU1OSQ5K130 101 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 PPM1LQ5SGD2 360 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 GLYATL3Q5SZD4 288 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 C9orf64Q5T6V5 341 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 REEP3Q6NUK4 255 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 FAHD1Q6P587 224 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 C12orf54Q6X4T0 127 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 WDR88Q6ZMY6 472 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SSX7Q7RTT5 188 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 SPATA12Q7Z6I5 190 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 ZNF410Q86VK4 478 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 RAB43Q86YS6 212 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 ELMOD2Q8IZ81 293 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CLYBLQ8N0X4 340 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 NHLRC2Q8NBF2 726 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 FBXO36Q8NEA4 188 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 OR2M3Q8NG83 312 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 OR10W1Q8NGF6 305 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 OR11H2Q8NH07 326 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 AKR7LQ8NHP1 331 aa-0.76□□□□□ -2.53
TRAJ28-201ENST00000390509 CT45A3Q8NHU0 189 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms