RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 SUPT3HO75486 399 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 EPPINO95925 133 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 IFNA21P01568 189 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 IGHV3-23P01764 117 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 BGLAPP02818 100 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 ZNF30P17039 623 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 AGTR1P30556 359 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 PRSS3P35030 304 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 CTRLP40313 264 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 REG1BP48304 166 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 ERFP50548 548 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 SLC18A1P54219 525 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 RAB5BP61020 215 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 TFAMQ00059 246 aaKnown RBP4.78□□□□□ -1.64
TRAV35-201ENST00000390462 GTF2BQ00403 316 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 IFITM2Q01629 132 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 ZNF45Q02386 682 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 AWAT2Q6E213 333 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 FAM71E1Q6IPT2 247 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 TMEM86BQ8N661 226 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 OR2Z1Q8NG97 314 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 OR1L8Q8NGR8 309 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 OR10D3Q8NH80 312 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 OR10G6Q8NH81 332 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 MFSD8Q8NHS3 518 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 CEP170P1Q96L14 293 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 ZNF778Q96MU6 729 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 SIGMAR1Q99720 223 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 MED18Q9BUE0 208 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 SLC29A3Q9BZD2 475 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 TXNIPQ9H3M7 391 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 PARVAQ9NVD7 372 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 ZNF223Q9UK11 482 aaPredicted RBP4.78□□□□□ -1.64
TRAV35-201ENST00000390462 PSG8Q9UQ74 426 aa4.78□□□□□ -1.64
TRAV35-201ENST00000390462 NFASCO94856 1347 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 PGPA6NDG6 321 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 EPM2AB3EWF7 344 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 SHISA9B4DS77 424 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 TRIM49D1C9J1S8 452 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 KRTAP4-16G5E9R7 235 aaPredicted RBP4.77□□□□□ -1.65
TRAV35-201ENST00000390462 H3BP45 60 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 TNFSF13O75888 250 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 GIPP09681 153 aaPredicted RBP4.77□□□□□ -1.65
TRAV35-201ENST00000390462 CXCL3P19876 107 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 SLC6A1P30531 599 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 POLR2IP36954 125 aaKnown RBP4.77□□□□□ -1.65
TRAV35-201ENST00000390462 CDK9P50750 372 aaKnown RBP4.77□□□□□ -1.65
TRAV35-201ENST00000390462 NANOS2P60321 138 aaKnown RBP4.77□□□□□ -1.65
TRAV35-201ENST00000390462 HERVK_113P61574 105 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 IFITM3Q01628 133 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 IHHQ14623 411 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 RBMY1FQ15415 496 aaKnown RBP4.77□□□□□ -1.65
TRAV35-201ENST00000390462 NSDHLQ15738 373 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 Q499Y3 187 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 TRMT12Q53H54 448 aaKnown RBP4.77□□□□□ -1.65
TRAV35-201ENST00000390462 PYCR3Q53H96 274 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 RSBN1Q5VWQ0 802 aaPredicted RBP4.77□□□□□ -1.65
TRAV35-201ENST00000390462 TMEM215Q68D42 235 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 OLIG3Q7RTU3 272 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 GLT6D1Q7Z4J2 308 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 TMEM144Q7Z5S9 345 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 NAA40Q86UY6 237 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 ZNF676Q8N7Q3 588 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 C7orf33Q8WU49 177 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 TMBIM1Q969X1 311 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 LYZL4Q96KX0 146 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 RTBDNQ9BSG5 229 aaPredicted RBP4.77□□□□□ -1.65
TRAV35-201ENST00000390462 TMEM243Q9BU79 118 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 BOLA2Q9H3K6 86 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 C12orf10Q9HB07 376 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 ARMC1Q9NVT9 282 aa4.77□□□□□ -1.65
TRAV35-201ENST00000390462 LCTP09848 1927 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 IGKV1-27A0A075B6S5 117 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 IGHV3OR16-10A0A075B7F0 116 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 A0A087WUJ7 227 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 A0A087WWV3 80 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 TEX50A0A1B0GTY4 177 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 MANBAO00462 879 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 GALR3O60755 368 aaPredicted RBP4.76□□□□□ -1.65
TRAV35-201ENST00000390462 ARL6IP5O75915 188 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 DHFRP00374 187 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 CA2P00918 260 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 IGLV2-11P01706 119 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 AMBPP02760 352 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 REG1AP05451 166 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 GTF2F2P13984 249 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 ZNF708P17019 499 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 CXCL2P19875 107 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 RPL5P46777 297 aaKnown RBP4.76□□□□□ -1.65
TRAV35-201ENST00000390462 H2BFSP57053 126 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 C1DQ13901 141 aaKnown RBP4.76□□□□□ -1.65
TRAV35-201ENST00000390462 GSG1Q2KHT4 349 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 FBXL19-AS1Q494R0 122 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 TCEAL5Q5H9L2 206 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 ZNF684Q5T5D7 378 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 ZNF343Q6P1L6 599 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 DEFB128Q7Z7B8 93 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 PHF13Q86YI8 300 aaPredicted RBP4.76□□□□□ -1.65
TRAV35-201ENST00000390462 FANCMQ8IYD8 2048 aa4.76□□□□□ -1.65
TRAV35-201ENST00000390462 SLC35G3Q8N808 338 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms