RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 C19orf67A6NJJ6 358 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 CHST1O43916 411 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 SOX15O60248 233 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 ICMTO60725 284 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 FOXH1O75593 365 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 KLF7O75840 302 aaPredicted RBP8.85□□□□□ -0.99
PKP4-201ENST00000389757 SLC35B1P78383 322 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 WDR31Q8NA23 367 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 NECAP1Q8NC96 275 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 CTDSP1Q9GZU7 261 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 GAR1Q9NY12 217 aaKnown RBP8.85□□□□□ -0.99
PKP4-201ENST00000389757 PRR13Q9NZ81 148 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 ZFC3H1O60293 1989 aaKnown RBP8.85□□□□□ -0.99
PKP4-201ENST00000389757 LOC105371242A0A075B767 164 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 ADAM10O14672 748 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 C17orf82Q86X59 251 aaPredicted RBP8.85□□□□□ -0.99
PKP4-201ENST00000389757 SAXO1Q8IYX7 474 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 C14orf79Q96F83 325 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 WDR61Q9GZS3 305 aaKnown RBP8.85□□□□□ -0.99
PKP4-201ENST00000389757 J3QR06 171 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 SCGB1D1O95968 90 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 HPRT1P00492 218 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 CECR9P0C854 216 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 PSG2P11465 335 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 LY6DQ14210 128 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 OR10G4Q8NGN3 311 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 OR10G9Q8NGN4 311 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 OR10G7Q8NGN6 311 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 ASCL3Q9NQ33 180 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 V9GYH0 126 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 LEUTXA8MZ59 168 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 CDS2O95674 445 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 APELAP0DMC3 54 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 COMMD1Q8N668 190 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 LPAR5Q9H1C0 372 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 FBXL17Q9UF56 701 aa8.85□□□□□ -0.99
PKP4-201ENST00000389757 A0A1B0GU03 582 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 H0Y8G0 127 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 P2RY1P47900 373 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 CEBPDP49716 269 aaPredicted RBP8.84□□□□□ -0.99
PKP4-201ENST00000389757 LINC01590Q5TEZ4 76 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 BVESQ8NE79 360 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 RSRP1Q9BUV0 290 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 CALYQ9NYX4 217 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 PITPNC1Q9UKF7 332 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 A0A1W2PP11 408 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 CPN1P15169 458 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 ARF6P62330 175 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 PAX5Q02548 391 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 C9orf106Q8NAJ2 232 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 IDI2-AS1Q9NZ38 188 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 TBX6O95947 436 aaPredicted RBP8.84□□□□□ -0.99
PKP4-201ENST00000389757 NPY1RP25929 384 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 HTR1DP28221 377 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 ERVFC1-1P60608 527 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 UBE2L3P68036 154 aaKnown RBP8.84□□□□□ -0.99
PKP4-201ENST00000389757 SSX7Q7RTT5 188 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 OR10Z1Q8NGY1 313 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 MRPL24Q96A35 216 aaKnown RBP8.84□□□□□ -0.99
PKP4-201ENST00000389757 PARP11Q9NR21 331 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 DLL3Q9NYJ7 618 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 OR51B2Q9Y5P1 312 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 DOCK6Q96HP0 2047 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 CACNA1IQ9P0X4 2223 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 CEP250Q9BV73 2442 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 LMX1BO60663 402 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 SLC25A53Q5H9E4 307 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 C1orf100Q5SVJ3 147 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 RNASE6Q93091 150 aaKnown RBP8.84□□□□□ -0.99
PKP4-201ENST00000389757 CLEC5AQ9NY25 188 aa8.84□□□□□ -0.99
PKP4-201ENST00000389757 ZNF646O15015 1829 aaPredicted RBP8.84□□□□□ -0.99
PKP4-201ENST00000389757 IGHV3-72A0A0B4J1Y9 119 aa8.84□□□□□ -1
PKP4-201ENST00000389757 RPL27AP46776 148 aaKnown RBP8.84□□□□□ -1
PKP4-201ENST00000389757 NRN1LQ496H8 165 aa8.84□□□□□ -1
PKP4-201ENST00000389757 MIDNQ504T8 468 aa8.84□□□□□ -1
PKP4-201ENST00000389757 OR8I2Q8N0Y5 310 aa8.84□□□□□ -1
PKP4-201ENST00000389757 G6PC2Q9NQR9 355 aa8.84□□□□□ -1
PKP4-201ENST00000389757 TECRQ9NZ01 308 aaKnown RBP8.84□□□□□ -1
PKP4-201ENST00000389757 PIKFYVEQ9Y2I7 2098 aa8.83□□□□□ -1
PKP4-201ENST00000389757 LIPFP07098 398 aa8.83□□□□□ -1
PKP4-201ENST00000389757 DYNLT3P51808 116 aa8.83□□□□□ -1
PKP4-201ENST00000389757 PAFAH1B2P68402 229 aa8.83□□□□□ -1
PKP4-201ENST00000389757 BSPH1Q075Z2 132 aa8.83□□□□□ -1
PKP4-201ENST00000389757 PLAC9Q5JTB6 97 aa8.83□□□□□ -1
PKP4-201ENST00000389757 ZNF66Q6ZN08 573 aa8.83□□□□□ -1
PKP4-201ENST00000389757 WASHC3Q9Y3C0 194 aa8.83□□□□□ -1
PKP4-201ENST00000389757 CKAP5Q14008 2032 aa8.83□□□□□ -1
PKP4-201ENST00000389757 DUXBA0A1W2PPF3 345 aa8.83□□□□□ -1
PKP4-201ENST00000389757 LOC390937A0A1W2PQ73 354 aa8.83□□□□□ -1
PKP4-201ENST00000389757 NKX2-6A6NCS4 301 aa8.83□□□□□ -1
PKP4-201ENST00000389757 CLDN18P56856 261 aa8.83□□□□□ -1
PKP4-201ENST00000389757 KLF9Q13886 244 aaPredicted RBP8.83□□□□□ -1
PKP4-201ENST00000389757 ZNF561Q8N587 486 aa8.83□□□□□ -1
PKP4-201ENST00000389757 NEU4Q8WWR8 484 aaPredicted RBP8.83□□□□□ -1
PKP4-201ENST00000389757 ABHD14BQ96IU4 210 aa8.83□□□□□ -1
PKP4-201ENST00000389757 CABLES2Q9BTV7 478 aa8.83□□□□□ -1
PKP4-201ENST00000389757 NKX6-2Q9C056 277 aaPredicted RBP8.83□□□□□ -1
PKP4-201ENST00000389757 RALYQ9UKM9 306 aaKnown RBP8.83□□□□□ -1
PKP4-201ENST00000389757 PDCD11Q14690 1871 aaKnown RBP8.83□□□□□ -1
PKP4-201ENST00000389757 LHX2P50458 406 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms