RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 IGLV2-14P01704 120 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 CD55P08174 381 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 OR8U9P0C7N5 309 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 VDAC1P21796 283 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 CHRNB4P30926 498 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 ID4P47928 161 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 FBXL19-AS1Q494R0 122 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 FAM219AQ8IW50 185 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 FAM71E2Q8N5Q1 922 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 OR4D5Q8NGN0 318 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 OR8U1Q8NH10 309 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 SLC25A32Q9H2D1 315 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 KCNS2Q9ULS6 477 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 NSG2Q9Y328 171 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 ARID1AO14497 2285 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 CACNA1DQ01668 2161 aa21.07■□□□□ 0.96
SHOX2-201ENST00000389589 CCL21O00585 134 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 ST8SIA3O43173 380 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 HKR1P10072 659 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 SFTPCP11686 197 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 ZBTB34Q8NCN2 500 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 OR52M1Q8NGK5 317 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 OR13A1Q8NGR1 328 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 ANGPTL6Q8NI99 470 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 NKX2-6A6NCS4 301 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 TAAR5O14804 337 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 SPINT2O43291 252 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 NMBP08949 121 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 TPT1P13693 172 aaKnown RBP21.06■□□□□ 0.96
SHOX2-201ENST00000389589 TNFRSF1AP19438 455 aa21.06■□□□□ 0.96
SHOX2-201ENST00000389589 ZCCHC14Q8WYQ9 949 aaKnown RBP21.06■□□□□ 0.96
SHOX2-201ENST00000389589 CLEC18AA5D8T8 446 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 C17orf100A8MU93 164 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 K7N7A8 449 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 SERPINE2P07093 398 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 GZMHP20718 246 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 RPL12P30050 165 aaKnown RBP21.05■□□□□ 0.96
SHOX2-201ENST00000389589 EDDM3AQ14507 147 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 NCMAPQ5T1S8 102 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 ADAM5Q6NVV9 412 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 UNQ6494/PRO21346Q6UXR6 183 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 CLEC18CQ8NCF0 446 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 OR51H1Q8NH63 302 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 ARL11Q969Q4 196 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 NCOR1P1Q9H4R4 102 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 ZC4H2Q9NQZ6 224 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 LIN7CQ9NUP9 197 aaKnown RBP21.05■□□□□ 0.96
SHOX2-201ENST00000389589 PPP1R3CQ9UQK1 317 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 DSCAMO60469 2012 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 ODAMA1E959 279 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 RNF212BA8MTL3 300 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 RRASP10301 218 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 IRF2P14316 349 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 CD80P33681 288 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 MSMO1Q15800 293 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 NMSQ5H8A3 153 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 THOC7Q6I9Y2 204 aaKnown RBP21.05■□□□□ 0.96
SHOX2-201ENST00000389589 COMMD7Q86VX2 200 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 ZNF561Q8N587 486 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 ZNF645Q8N7E2 425 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 TPRX1Q8N7U7 411 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 OR52L2PQ8NGH6 319 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 ABHD14BQ96IU4 210 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 PARP12Q9H0J9 701 aaKnown RBP21.05■□□□□ 0.96
SHOX2-201ENST00000389589 CYTL1Q9NRR1 136 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 POMT1Q9Y6A1 747 aa21.05■□□□□ 0.96
SHOX2-201ENST00000389589 SPTA1P02549 2419 aa21.04■□□□□ 0.96
SHOX2-201ENST00000389589 HTD2P86397 168 aa21.04■□□□□ 0.96
SHOX2-201ENST00000389589 CR1LQ2VPA4 569 aa21.04■□□□□ 0.96
SHOX2-201ENST00000389589 PLEKHF2Q9H8W4 249 aa21.04■□□□□ 0.96
SHOX2-201ENST00000389589 MED9Q9NWA0 146 aa21.04■□□□□ 0.96
SHOX2-201ENST00000389589 COQ3Q9NZJ6 369 aa21.04■□□□□ 0.96
SHOX2-201ENST00000389589 PDZD9Q8IXQ8 264 aa21.03■□□□□ 0.96
SHOX2-201ENST00000389589 DRAM1Q8N682 238 aa21.03■□□□□ 0.96
SHOX2-201ENST00000389589 RNASE6Q93091 150 aaKnown RBP21.03■□□□□ 0.96
SHOX2-201ENST00000389589 PRORYQ9H606 182 aa21.03■□□□□ 0.96
SHOX2-201ENST00000389589 ATXN7O15265 892 aaPredicted RBP21.03■□□□□ 0.96
SHOX2-201ENST00000389589 KDF1Q8NAX2 398 aaPredicted RBP21.03■□□□□ 0.96
SHOX2-201ENST00000389589 GALNT11Q8NCW6 608 aa21.03■□□□□ 0.96
SHOX2-201ENST00000389589 SDSLQ96GA7 329 aa21.03■□□□□ 0.96
SHOX2-201ENST00000389589 OR2S2Q9NQN1 319 aa21.03■□□□□ 0.96
SHOX2-201ENST00000389589 NDRG3Q9UGV2 375 aa21.03■□□□□ 0.96
SHOX2-201ENST00000389589 C15orf65H3BRN8 121 aa21.02■□□□□ 0.96
SHOX2-201ENST00000389589 ADAM20O43506 726 aa21.02■□□□□ 0.96
SHOX2-201ENST00000389589 SSTR5P35346 364 aa21.02■□□□□ 0.96
SHOX2-201ENST00000389589 P2RX3P56373 397 aa21.02■□□□□ 0.96
SHOX2-201ENST00000389589 EIF5AP63241 154 aaKnown RBP21.02■□□□□ 0.96
SHOX2-201ENST00000389589 STUMQ69YW2 141 aa21.02■□□□□ 0.96
SHOX2-201ENST00000389589 BAP18Q8IXM2 172 aa21.02■□□□□ 0.96
SHOX2-201ENST00000389589 A0A1B0GW55 424 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 SHISA9B4DS77 424 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 DUX4L2P0CJ85 424 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 DUX4L3P0CJ86 424 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 DUX4L4P0CJ87 422 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 DUX4L5P0CJ88 424 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 DUX4L6P0CJ89 424 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 DUX4L7P0CJ90 424 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 MUC1P15941 1255 aaPredicted RBP21.01■□□□□ 0.95
SHOX2-201ENST00000389589 NKX2-1P43699 371 aaPredicted RBP21.01■□□□□ 0.95
SHOX2-201ENST00000389589 P2RY1P47900 373 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms