RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 PEAR1Q5VY43 1037 aaPredicted RBP11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 RPUSD3Q6P087 351 aaKnown RBP11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 ZNRF1Q8ND25 227 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 OR5P3Q8WZ94 311 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 C20orf24Q9BUV8 137 aa11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 REPIN1Q9BWE0 567 aaKnown RBP11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 FOXD3Q9UJU5 478 aaPredicted RBP11.23□□□□□ -0.61
PTPRN2-202ENST00000389416 NKX2-6A6NCS4 301 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 J3QW42 95 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 GLIPR1P48060 266 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 ATP5J2P56134 94 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 TAS2R45P59539 299 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 MPPED2Q15777 294 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 PRSS54Q6PEW0 395 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 MDS2Q8NDY4 140 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 VSTM2AQ8TAG5 236 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 IGHV3-72A0A0B4J1Y9 119 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 MED19A0JLT2 244 aaPredicted RBP11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 CHST1O43916 411 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 USF2Q15853 346 aaPredicted RBP11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 ZNF787Q6DD87 383 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 MITD1Q8WV92 249 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 ABCA1O95477 2261 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 SS18L1O75177 396 aaPredicted RBP11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 KIR2DS2P43631 304 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 PXDC1Q5TGL8 231 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 UNQ6494/PRO21346Q6UXR6 183 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 AKR1E2Q96JD6 320 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 C1QTNF5Q9BXJ0 243 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 Q9N2K0 584 aa11.22□□□□□ -0.61
PTPRN2-202ENST00000389416 OR13D1Q8NGV5 346 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 ST6GAL2Q96JF0 529 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 HSD17B10Q99714 261 aaKnown RBP11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 ZNF319Q9P2F9 582 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 GTF3C1Q12789 2109 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 TP53BP1Q12888 1972 aaPredicted RBP11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 IGHV1-69-2A0A0G2JMI3 117 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 COX7A2P2O60397 106 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 CRYBA1P05813 215 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 OR10J4P0C629 311 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 NQO2P16083 231 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 VAX1Q5SQQ9 334 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 H3F3CQ6NXT2 135 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 ACSM6Q6P461 480 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 MARS2Q96GW9 593 aaKnown RBP11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 TPPP3Q9BW30 176 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 NMES1Q9C002 83 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 OR1A1Q9P1Q5 309 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 FBXL17Q9UF56 701 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 MSRB2Q9Y3D2 182 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 HILPDAQ9Y5L2 63 aa11.21□□□□□ -0.61
PTPRN2-202ENST00000389416 RPS10-NUDT3A0A1W2PQS6 291 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 B9A039 149 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 SLC25A4P12235 298 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 APOBEC3AP31941 199 aaPredicted RBP11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 RPS10P46783 165 aaKnown RBP11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 ZCCHC24Q8N2G6 241 aaKnown RBP11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 LEAP2Q969E1 77 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 FKBP11Q9NYL4 201 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 CRYM-AS1A6NIL9 109 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 CST4P01036 141 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 MMDQ15546 238 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 Q56UQ5 140 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 OR11H7Q8NGC8 314 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 OR10S1Q8NGN2 331 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 OR4F5Q8NH21 305 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 RXFP4Q8TDU9 374 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 RPUSD4Q96CM3 377 aaKnown RBP11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 OR4F4Q96R69 305 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 ABHD14AQ9BUJ0 271 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 MTCH1Q9NZJ7 389 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 OPN4Q9UHM6 478 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 KIAA2026Q5HYC2 2103 aa11.21□□□□□ -0.62
PTPRN2-202ENST00000389416 C2orf16Q68DN1 1984 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 K7N7A8 449 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 MBP02144 154 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 INHBBP09529 407 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 UBE2G2P60604 165 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 ARF6P62330 175 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 HIST2H3PS2Q5TEC6 136 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 SCMH1Q96GD3 660 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 MEGF10Q96KG7 1140 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 PRO3102Q9H379 93 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 MDFIC2A0A1B0GVS7 189 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A10PA6NDY2 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A18PA6NE21 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A16PA6NEW6 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A20PA6NIJ5 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A8PA6NJQ4 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A7PA6NKC0 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A22PA8MWA6 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A12PA8MX19 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A5PA8MXJ8 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A23PA8MXZ1 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A15PP0C7V4 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A13PP0C7W8 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A14PP0C7W9 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM90A24PP0C7X0 464 aa11.2□□□□□ -0.62
PTPRN2-202ENST00000389416 TMEM33P57088 247 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms