RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 PRR31Q5SQ13 230 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 LINC01590Q5TEZ4 76 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 CIB3Q96Q77 187 aaPredicted RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 IFT22Q9H7X7 185 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 A0A1B0GTQ1 180 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 C7orf66A4D0T2 115 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 MSGN1A6NI15 193 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 K7EQM0 130 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 TSPAN2O60636 221 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 REG1AP05451 166 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 FAM157CP0CG43 387 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 PGA3P0DJD8 388 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 IER3P46695 156 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 MMP16P51512 607 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 P2RY4P51582 365 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 PTTG1IPP53801 180 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 MRPS11P82912 194 aaKnown RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 LRRC10Q5BKY1 277 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 FAM201AQ5SY85 155 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 C5orf24Q7Z6I8 188 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 OR2D3Q8NGH3 330 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 ZNF596Q8TC21 504 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 DTD1Q8TEA8 209 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 RPEQ96AT9 228 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 CHST5Q9GZS9 411 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 NPTNQ9Y639 398 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 HELZP42694 1942 aaKnown RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 TRAV17A0A0B4J275 112 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 TRGC2P03986 189 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 CNN1P51911 297 aaKnown RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 HNRNPA3P51991 378 aaKnown RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 MPPED2Q15777 294 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 BSXQ3C1V8 233 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 ZNF343Q6P1L6 599 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 DPPA3Q6W0C5 159 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 OR2T6Q8NHC8 308 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 C5orf66Q9H5L9 145 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 MRPS18AQ9NVS2 196 aaKnown RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 IL36RNQ9UBH0 155 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 IL17BQ9UHF5 180 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 RBBP6Q7Z6E9 1792 aaKnown RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 IGLV1-36A0A0B4J1U3 117 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 A0A0G2JMM0 328 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 A0A1W2PPB8 328 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 A0A1W2PRS3 328 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 KIR3DP1A8MWS1 328 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 ATXN7O15265 892 aaPredicted RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 RECKO95980 971 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 UBE2L3P68036 154 aaKnown RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 DCAF10Q5QP82 559 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 HCP5Q6MZN7 132 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 WDR74Q6RFH5 385 aaPredicted RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 NUFIP2Q7Z417 695 aaKnown RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 APOBEC4Q8WW27 367 aaKnown RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 ADIPOR1Q96A54 375 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 RAB40CQ96S21 281 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 CCL13Q99616 98 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 TTTY12Q9BZ98 90 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 ARHGAP21Q5T5U3 1957 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 LRRC37AA6NMS7 1700 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 A0A087X0M5 115 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 A0A1B0GX30 115 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 PRR32B1ATL7 298 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 DXOO77932 396 aaKnown RBP4.32□□□□□ -1.72
LTN1-202ENST00000389194 CLDN14O95500 239 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 S100A8P05109 93 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 HOXC4P09017 264 aaPredicted RBP4.32□□□□□ -1.72
LTN1-202ENST00000389194 RAB5AP20339 215 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 CD81P60033 236 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 RANP62826 216 aaKnown RBP4.32□□□□□ -1.72
LTN1-202ENST00000389194 COL10A1Q03692 680 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 RNPS1Q15287 305 aaKnown RBP4.32□□□□□ -1.72
LTN1-202ENST00000389194 KIAA1644Q3SXP7 199 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 ZNF260Q3ZCT1 412 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 CYB5R2Q6BCY4 276 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 UQCC3Q6UW78 93 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 OR1L1Q8NH94 360 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 VN1R17PQ8TDU5 208 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 S4R3C0 116 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 LOC389332A0A1B0GUA5 103 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 AP4M1O00189 453 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 WNT9BO14905 357 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 NEURL1O76050 574 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 MBP02144 154 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 PGA4P0DJD7 388 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 ERGP11308 486 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 RPS23P62266 143 aaKnown RBP4.32□□□□□ -1.72
LTN1-202ENST00000389194 EIF3IQ13347 325 aaKnown RBP4.32□□□□□ -1.72
LTN1-202ENST00000389194 KRTCAP3Q53RY4 240 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 ST6GALNAC3Q8NDV1 305 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 OR10A7Q8NGE5 316 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 PCNX2A6NKB5 2137 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 WDR81Q562E7 1941 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 TGIF2-C20orf24A0A0A6YYL0 155 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 LINC00862A6NCI5 91 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 FBLL1A6NHQ2 334 aaKnown RBP4.32□□□□□ -1.72
LTN1-202ENST00000389194 PROB1E7EW31 1015 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 C5orf67F2Z3F1 127 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 VDAC1P21796 283 aa4.32□□□□□ -1.72
LTN1-202ENST00000389194 CD40P25942 277 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms