RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 LYPLA2O95372 231 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 HSPA4LO95757 839 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 IGHV3-7P01780 117 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 MT-ND6P03923 174 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 MAS1P04201 325 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 RPN2P04844 631 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 ALDOBP05062 364 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 FGF4P08620 206 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CT45A6P0DMU7 189 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CT45A5P0DMU8 189 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CT45A7P0DMV0 189 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CTSEP14091 401 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 PFKFB1P16118 471 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 GABRB1P18505 474 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 EIF2S2P20042 333 aaKnown RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 NTF3P20783 257 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 U2AF2P26368 475 aaKnown RBP eCLIP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 HTR2AP28223 471 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CYLC1P35663 651 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 GGT2P36268 569 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARR3P36575 388 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 NAA10P41227 235 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CAPZA2P47755 286 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CAPZBP47756 277 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 HNMTP50135 292 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARL4CP56559 192 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 TBPL1P62380 186 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 PRAMEP78395 509 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 HTD2P86397 168 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 FGL1Q08830 312 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 NCBP1Q09161 790 aaKnown RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 GPR176Q14439 515 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARHGAP19Q14CB8 494 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRAM2Q15035 370 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARL6IP1Q15041 203 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 ELOCQ15369 112 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 NEDD8Q15843 81 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 LRRC10Q5BKY1 277 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 RAB41Q5JT25 222 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 DDI2Q5TDH0 399 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 TMEM42Q69YG0 159 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 UNQ5815/PRO19632Q6UWF5 114 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 C2orf82Q6UX34 121 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CLEC19AQ6UXS0 136 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 LDHAL6AQ6ZMR3 332 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CLEC20AQ6ZU45 233 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 GLT6D1Q7Z4J2 308 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 LHFPL3Q86UP9 236 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CDR2LQ86X02 465 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CENPLQ8N0S6 344 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 NKAIN3Q8N8D7 197 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 SPC24Q8NBT2 197 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 WFDC11Q8NEX6 87 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR5AU1Q8NGC0 362 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR5D14Q8NGL3 314 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR4C13Q8NGP0 309 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR10K1Q8NGX5 313 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR10J5Q8NHC4 309 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CD300LFQ8TDQ1 290 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CASTOR1Q8WTX7 329 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 PIH1D2Q8WWB5 315 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 P2RX5Q93086 422 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC25A36Q96CQ1 311 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 SH3YL1Q96HL8 342 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 SENP8Q96LD8 212 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 PPP1R36Q96LQ0 422 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 GLT1D1Q96MS3 346 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR5B2Q96R09 309 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 TREX2Q9BQ50 279 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 PECRQ9BY49 303 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 C11orf1Q9H5F2 150 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 SYNDIG1Q9H7V2 258 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CAB39LQ9H9S4 337 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 B3GNT2Q9NY97 397 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 MRPL39Q9NYK5 338 aaKnown RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CDKN2A-AS1Q9UH64 79 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 TBC1D24Q9ULP9 559 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CLEC4AQ9UMR7 237 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 KCNIP3Q9Y2W7 256 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 PTRH2Q9Y3E5 179 aaKnown RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CBY1Q9Y3M2 126 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 TTLL3Q9Y4R7 772 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 HSPE1-MOB4S4R3N1 261 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CEP152O94986 1710 aa-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARHGEF28Q8N1W1 1705 aaKnown RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 CPSF1Q10570 1443 aaKnown RBP-1.91□□□□□ -2.72
RNU6-540P-201ENST00000384622 GAPVD1Q14C86 1478 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 BAZ1BQ9UIG0 1483 aaKnown RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRAV23DV6A0A075B6W5 121 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 IGHV3-21A0A0B4J1V1 117 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRAV12-1A0A0B4J245 112 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRBV7-9A0A0J9YWB2 115 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 TEX50A0A1B0GTY4 177 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 C13orf42A0A1B0GVH6 325 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 NPIPA5E9PKD4 350 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 I3L2K1 104 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 M0QY20 66 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 PAPSS1O43252 624 aaPredicted RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 MED7O43513 233 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 NDUFC1O43677 76 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms