RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ZNF554Q86TJ5 538 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 IZUMO1Q8IYV9 350 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 OR9G1Q8NH87 305 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 ZNF596Q8TC21 504 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 MAFIPQ8WZ33 124 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 PHF21AQ96BD5 680 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 Q9N2K0 584 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 RAB9BQ9NP90 201 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 COMMD3Q9UBI1 195 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 GNG12Q9UBI6 72 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 RSL24D1Q9UHA3 163 aaKnown RBP13.09□□□□□ -0.31
SNRPB-201ENST00000381342 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
SNRPB-201ENST00000381342 A0A1W2PPE3 182 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 EIF4EP06730 217 aaKnown RBP13.08□□□□□ -0.32
SNRPB-201ENST00000381342 TMEM30BQ3MIR4 351 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 ZNF260Q3ZCT1 412 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 AWAT1Q58HT5 328 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 DTX3Q8N9I9 347 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 BEND2Q8NDZ0 799 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 OR52L2PQ8NGH6 319 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 OR52M1Q8NGK5 317 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 NUDCD2Q8WVJ2 157 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 IL1F10Q8WWZ1 152 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 ABCG5Q9H222 651 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 MMP28Q9H239 520 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNRPB-201ENST00000381342 HILPDAQ9Y5L2 63 aa13.08□□□□□ -0.32
SNRPB-201ENST00000381342 TRAV18A0A075B6X5 111 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 CCDC160A6NGH7 325 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 J3QR06 171 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 SLC31A2O15432 143 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 GSTP1P09211 210 aaKnown RBP13.07□□□□□ -0.32
SNRPB-201ENST00000381342 HTR1DP28221 377 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 PPP1CCP36873 323 aaKnown RBP13.07□□□□□ -0.32
SNRPB-201ENST00000381342 IER3P46695 156 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 PRRX1P54821 245 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 ARL6IP1Q15041 203 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 SSX2Q16385 188 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 MINOS1Q5TGZ0 78 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 HACD4Q5VWC8 232 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 TMEM86BQ8N661 226 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 DYNC2LI1Q8TCX1 351 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 SSMEM1Q8WWF3 244 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 ACOT12Q8WYK0 555 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 OR2S2Q9NQN1 319 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 ZNF230Q9UIE0 474 aaPredicted RBP13.07□□□□□ -0.32
SNRPB-201ENST00000381342 JPT1Q9UK76 154 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 MINOS1-NBL1R4GNA1 71 aa13.07□□□□□ -0.32
SNRPB-201ENST00000381342 A0A0A6YYH2 397 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 A6NJ64 397 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 BUB1B-PAK6H3BSN5 160 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 HPGDSO60760 199 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 SCTP09683 121 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
SNRPB-201ENST00000381342 TALDO1P37837 337 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 GNG2P59768 71 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 ZNF439Q8NDP4 499 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 AP3S1Q92572 193 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 GALMQ96C23 342 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 MALSU1Q96EH3 234 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 DPAGT1Q9H3H5 408 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 DIABLOQ9NR28 239 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 MGAT4AQ9UM21 535 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 AMMECR1Q9Y4X0 333 aaPredicted RBP13.06□□□□□ -0.32
SNRPB-201ENST00000381342 POMT1Q9Y6A1 747 aa13.06□□□□□ -0.32
SNRPB-201ENST00000381342 BTBD17A6NE02 478 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 H3BUX3 64 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 SSX5O60225 188 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 PTHLHP12272 177 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 SOX6P35712 828 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 HTD2P86397 168 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 LRRC75BQ2VPJ9 315 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 TPTE2P1Q5T6R2 138 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 MZT2AQ6P582 158 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 OR10X1Q8NGY0 326 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 SGMS2Q8NHU3 365 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 S100A16Q96FQ6 103 aaKnown RBP13.05□□□□□ -0.32
SNRPB-201ENST00000381342 SSX3Q99909 188 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 CHIAQ9BZP6 476 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 MEGF9Q9H1U4 602 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 CCDC59Q9P031 241 aaKnown RBP13.05□□□□□ -0.32
SNRPB-201ENST00000381342 OR1A1Q9P1Q5 309 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 DPM3Q9P2X0 92 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 SLC23A1Q9UHI7 598 aa13.05□□□□□ -0.32
SNRPB-201ENST00000381342 IGKV1-6A0A0C4DH72 117 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 POM121CA8CG34 1229 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 LEUTXA8MZ59 168 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 TRDCB7Z8K6 153 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 LY6LH3BQJ8 138 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 XRCC3O43542 346 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 APOA1P02647 267 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 ELK1P19419 428 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 DTYMKP23919 212 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 CEACAM3P40198 252 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 TAS2R20P59543 309 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 MADCAM1Q13477 382 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 HERPUD1Q15011 391 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 PNLIPRP3Q17RR3 467 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 MORN2Q502X0 79 aa13.04□□□□□ -0.32
SNRPB-201ENST00000381342 TMEM69Q5SWH9 247 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms