RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 COLCA1Q6ZS62 124 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 GTSCR1Q86UQ5 136 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 DMRTC2Q8IXT2 367 aaPredicted RBP5.62□□□□□ -1.51
NEDD9-202ENST00000379446 ADPRHL1Q8NDY3 354 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 OR51A4Q8NGJ6 313 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 HGDQ93099 445 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 TOLLIPQ9H0E2 274 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 SLC25A32Q9H2D1 315 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 DPH3P1Q9H4G8 78 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 TAS2R5Q9NYW4 299 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 FBXO7Q9Y3I1 522 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 A8MXK9 166 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 TSPAN2O60636 221 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 MSMBP08118 114 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 IGHV1-2P23083 117 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 BTCP35070 178 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 KLF9Q13886 244 aaPredicted RBP5.62□□□□□ -1.51
NEDD9-202ENST00000379446 RNF212Q495C1 297 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 FAM201AQ5SY85 155 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 SGPP2Q8IWX5 399 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 SLC2A8Q9NY64 477 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 PRR13Q9NZ81 148 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 FOXJ3Q9UPW0 622 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 KLHDC2Q9Y2U9 406 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 WIPI2Q9Y4P8 454 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 SHANK1Q9Y566 2161 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 MKI67P46013 3256 aaKnown RBP5.62□□□□□ -1.51
NEDD9-202ENST00000379446 C17orf51A8MQB3 221 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 PIN1P1O15428 100 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 CLDN1O95832 211 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 CST2P09228 141 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 CTLA4P16410 223 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 TBPP20226 339 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 IL11P20809 199 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 GRNP28799 593 aaKnown RBP5.62□□□□□ -1.51
NEDD9-202ENST00000379446 GLYATL3Q5SZD4 288 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 OR2G2Q8NGZ5 317 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 ITLN2Q8WWU7 325 aaPredicted RBP5.62□□□□□ -1.51
NEDD9-202ENST00000379446 FAM3DQ96BQ1 224 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 HSD17B10Q99714 261 aaKnown RBP5.62□□□□□ -1.51
NEDD9-202ENST00000379446 ATG101Q9BSB4 218 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 ZMAT4Q9H898 229 aa5.62□□□□□ -1.51
NEDD9-202ENST00000379446 TRAV8-7A0A075B6U6 113 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 A0A0D9SG52 128 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 TMEM235A6NFC5 223 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 OGG1O15527 345 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 PNPP00491 289 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 MBP02144 154 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 GAPDHP04406 335 aaKnown RBP5.61□□□□□ -1.51
NEDD9-202ENST00000379446 PRDX2P32119 198 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 EMP1P54849 157 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 RAB11AP62491 216 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 RRN3P1Q2M238 152 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 ZNF626Q68DY1 528 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 STEAP1BQ6NZ63 245 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 CMTM2Q8TAZ6 248 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 DMRTA2Q96SC8 542 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 PLEKHF2Q9H8W4 249 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 WSB1Q9Y6I7 421 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 SFTA3P0C7M3 94 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 CRYGSP22914 178 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 SRSF3P84103 164 aaKnown RBP5.61□□□□□ -1.51
NEDD9-202ENST00000379446 ZNF679Q8IYX0 411 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 SSMEM1Q8WWF3 244 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 RHOFQ9HBH0 211 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 EXOSC3Q9NQT5 275 aaKnown RBP5.61□□□□□ -1.51
NEDD9-202ENST00000379446 MRM2Q9UI43 246 aaKnown RBP5.61□□□□□ -1.51
NEDD9-202ENST00000379446 LSM5Q9Y4Y9 91 aaKnown RBP5.61□□□□□ -1.51
NEDD9-202ENST00000379446 IGLV3-12A0A075B6K2 115 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 ZNF736B4DX44 427 aaPredicted RBP5.61□□□□□ -1.51
NEDD9-202ENST00000379446 NDUFS8O00217 210 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 TM4SF5O14894 197 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 TCAPO15273 167 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 MGMTP16455 207 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 ZFP36P26651 326 aaKnown RBP5.61□□□□□ -1.51
NEDD9-202ENST00000379446 HTR2CP28335 458 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 PCP4P48539 62 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 CAMLGP49069 296 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 EFNB2P52799 333 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 MRPS10P82664 201 aaKnown RBP5.61□□□□□ -1.51
NEDD9-202ENST00000379446 MRPS34P82930 218 aaKnown RBP5.61□□□□□ -1.51
NEDD9-202ENST00000379446 ZNF124Q15973 351 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 SLC35D3Q5M8T2 416 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 OR5T1Q8NG75 326 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 RNF141Q8WVD5 230 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 STARD4Q96DR4 205 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 SLC25A38Q96DW6 304 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 SPIN2AQ99865 258 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 SPIN2BQ9BPZ2 258 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 SLC35D1Q9NTN3 355 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 TAS2R4Q9NYW5 299 aa5.61□□□□□ -1.51
NEDD9-202ENST00000379446 A0A0C4DFX4 3053 aa5.6□□□□□ -1.51
NEDD9-202ENST00000379446 SMIM6P0DI80 62 aa5.6□□□□□ -1.51
NEDD9-202ENST00000379446 HLA-DOBP13765 273 aa5.6□□□□□ -1.51
NEDD9-202ENST00000379446 FABP4P15090 132 aa5.6□□□□□ -1.51
NEDD9-202ENST00000379446 RAB5CP51148 216 aa5.6□□□□□ -1.51
NEDD9-202ENST00000379446 TPPP2P59282 170 aa5.6□□□□□ -1.51
NEDD9-202ENST00000379446 ACTBP60709 375 aa5.6□□□□□ -1.51
NEDD9-202ENST00000379446 C3orf36Q3SXR2 165 aa5.6□□□□□ -1.51
NEDD9-202ENST00000379446 FAM106AQ4KMX7 169 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms