RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CCDC59Q9P031 241 aaKnown RBP15.18■□□□□ 0.02
SSU72-203ENST00000378725 ZNRD1Q9P1U0 126 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 DPM3Q9P2X0 92 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 JPT1Q9UK76 154 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 IGHV3-43A0A0B4J1X8 118 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 TMEM235A6NFC5 223 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 IGHV3-7P01780 117 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 EIF4EP06730 217 aaKnown RBP15.17■□□□□ 0.02
SSU72-203ENST00000378725 IGHV3-43DP0DP04 118 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 DTYMKP23919 212 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 TALDO1P37837 337 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 IER3P46695 156 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 HLA-DRB3P79483 266 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 SLC9A3R2Q15599 337 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 AANATQ16613 207 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 MORN2Q502X0 79 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 TMEM86BQ8N661 226 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 ZNF439Q8NDP4 499 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 OR52L2PQ8NGH6 319 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 MMP28Q9H239 520 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 AUNIPQ9H7T9 357 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 GNG12Q9UBI6 72 aa15.17■□□□□ 0.02
SSU72-203ENST00000378725 RSL24D1Q9UHA3 163 aaKnown RBP15.17■□□□□ 0.02
SSU72-203ENST00000378725 DNAJC9-AS1A6NH13 148 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 LEUTXA8MZ59 168 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 HOXA3O43365 443 aaPredicted RBP15.16■□□□□ 0.02
SSU72-203ENST00000378725 SSX5O60225 188 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 YPEL1O60688 119 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 HPGDSO60760 199 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 SCTP09683 121 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 ELK1P19419 428 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 ZNF134P52741 427 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 STEAP3Q658P3 488 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 SSMEM1Q8WWF3 244 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 YPEL2Q96QA6 119 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 ZNF230Q9UIE0 474 aaPredicted RBP15.16■□□□□ 0.02
SSU72-203ENST00000378725 POMT1Q9Y6A1 747 aa15.16■□□□□ 0.02
SSU72-203ENST00000378725 CCDC160A6NGH7 325 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 VGLL3A8MV65 326 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 KIR2DS4P43632 304 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 GNG10P50151 68 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 GNG2P59768 71 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 UBA52P62987 128 aaKnown RBP15.15■□□□□ 0.02
SSU72-203ENST00000378725 KIR2DS1Q14954 304 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 SSX2Q16385 188 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 KRTAP21-3Q3LHN1 58 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 CT45A1Q5HYN5 189 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 SLC25A48Q6ZT89 311 aaKnown RBP15.15■□□□□ 0.02
SSU72-203ENST00000378725 IZUMO1Q8IYV9 350 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 OR10V1Q8NGI7 309 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 OR4A4PQ8NGN8 299 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 CT45A3Q8NHU0 189 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 ZFAND2BQ8WV99 257 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 NUDCD2Q8WVJ2 157 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 OCSTAMPQ9BR26 566 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 DPAGT1Q9H3H5 408 aa15.15■□□□□ 0.02
SSU72-203ENST00000378725 AMMECR1Q9Y4X0 333 aaPredicted RBP15.15■□□□□ 0.02
SSU72-203ENST00000378725 IGKV1-6A0A0C4DH72 117 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 SMIM31A0A1B0GVY4 71 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 A0A1W2PPE3 182 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 FABP7O15540 132 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 DIRAS3O95661 229 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 GSTT2P0CG29 244 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 GSTT2BP0CG30 244 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 PAX6P26367 422 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 CEACAM3P40198 252 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 MNDAP41218 407 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 TAS2R20P59543 309 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 SRSF2Q01130 221 aaKnown RBP15.14■□□□□ 0.01
SSU72-203ENST00000378725 GNMTQ14749 295 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 TMEM69Q5SWH9 247 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 TPTE2P1Q5T6R2 138 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 DTX3Q8N9I9 347 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 IL1F10Q8WWZ1 152 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 SLIRPQ9GZT3 109 aaKnown RBP15.14■□□□□ 0.01
SSU72-203ENST00000378725 NDUFA13Q9P0J0 144 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 HILPDAQ9Y5L2 63 aa15.14■□□□□ 0.01
SSU72-203ENST00000378725 OOSP1A8MZH6 123 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 TRIM77I1YAP6 450 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 SLC31A2O15432 143 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 RGS11O94810 467 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 IGHV4-59P01825 116 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 HLA-DQB1P01920 261 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 RNASE1P07998 156 aaKnown RBP15.13■□□□□ 0.01
SSU72-203ENST00000378725 ZBTB25P24278 435 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 PPP1CCP36873 323 aaKnown RBP15.13■□□□□ 0.01
SSU72-203ENST00000378725 DYNLT3P51808 116 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 HERPUD1Q15011 391 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 LRRC75BQ2VPJ9 315 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 PIFOQ8TCI5 191 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 MAFIPQ8WZ33 124 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 DUX5Q96PT3 197 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 SSX3Q99909 188 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 ST6GALNAC5Q9BVH7 336 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 NXF2Q9GZY0 626 aaKnown RBP15.13■□□□□ 0.01
SSU72-203ENST00000378725 TOLLIPQ9H0E2 274 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 MIXL1Q9H2W2 232 aa15.13■□□□□ 0.01
SSU72-203ENST00000378725 IGKV1D-8A0A087WSZ0 117 aa15.12■□□□□ 0.01
SSU72-203ENST00000378725 DPPA5A6NC42 116 aa15.12■□□□□ 0.01
SSU72-203ENST00000378725 CTDSP2O14595 271 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms