RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 STUMQ69YW2 141 aa11.22□□□□□ -0.61
PRPF18-202ENST00000378572 GAPTQ8N292 157 aa11.22□□□□□ -0.61
PRPF18-202ENST00000378572 MINDY2Q8NBR6 621 aa11.22□□□□□ -0.61
PRPF18-202ENST00000378572 DNTTIP1Q9H147 329 aa11.22□□□□□ -0.61
PRPF18-202ENST00000378572 C12orf4Q9NQ89 552 aa11.22□□□□□ -0.61
PRPF18-202ENST00000378572 IFT46Q9NQC8 304 aa11.22□□□□□ -0.61
PRPF18-202ENST00000378572 VPREB3Q9UKI3 123 aa11.22□□□□□ -0.61
PRPF18-202ENST00000378572 TGP01266 2768 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 IGKV1D-17A0A075B6S4 117 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 TRBV6-6A0A0A6YYG2 114 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 UBE2QL1A1L167 161 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 NAP1L6A6NFF2 107 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 CENPXA8MT69 81 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 SIRPB1O00241 398 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 LYRM1O43325 122 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 NAPSAO96009 420 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 TFF1P04155 84 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 CSN2P05814 226 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 TBPP20226 339 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 GABRA2P47869 451 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 KRTAP10-3P60369 221 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 HOGA1Q86XE5 327 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 PNKDQ8N490 385 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 PPP1R35Q8TAP8 253 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
PRPF18-202ENST00000378572 NEK7Q8TDX7 302 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 SDSLQ96GA7 329 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 DCTN5Q9BTE1 182 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 C11orf54Q9H0W9 315 aaPredicted RBP11.21□□□□□ -0.61
PRPF18-202ENST00000378572 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.61
PRPF18-202ENST00000378572 SLC25A10Q9UBX3 287 aaPredicted RBP11.21□□□□□ -0.61
PRPF18-202ENST00000378572 MEIS3P1A6NDR6 274 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 GPR37O15354 613 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 ZNF737O75373 536 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 TSPAN15O95858 294 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 CD74P04233 296 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 AKAIN1P0CW23 69 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 FAUP35544 74 aaKnown RBP11.21□□□□□ -0.62
PRPF18-202ENST00000378572 ATPAF1Q5TC12 328 aaPredicted RBP11.21□□□□□ -0.62
PRPF18-202ENST00000378572 MZT2BQ6NZ67 158 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 Q6ZS49 121 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 Q6ZSV7 163 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 C1QL4Q86Z23 238 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 CD177Q8N6Q3 437 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 LY6G5BQ8NDX9 201 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 CHPT1Q8WUD6 406 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 CYYR1Q96J86 154 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 ETAA1Q9NY74 926 aa11.21□□□□□ -0.62
PRPF18-202ENST00000378572 VWFP04275 2813 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 RNASEK-C17orf49H0YIS7 233 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 PSPNO60542 156 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 FCGR3AP08637 254 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 SAA4P35542 130 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 CEBPDP49716 269 aaPredicted RBP11.2□□□□□ -0.62
PRPF18-202ENST00000378572 PROK1P58294 105 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 COL10A1Q03692 680 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 OXA1LQ15070 435 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 C2orf68Q2NKX9 166 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 ACTBL2Q562R1 376 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 NCR3LG1Q68D85 454 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 ZNF788Q6ZQV5 615 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 FAM185AQ8N0U4 392 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 ZNF561Q8N587 486 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 GVQW1Q8N7I0 195 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 TMEM185AQ8NFB2 350 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 SNAPC3Q92966 411 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 MED30Q96HR3 178 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 SNX22Q96L94 193 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 PPA2Q9H2U2 334 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 HRASLSQ9HDD0 168 aa11.2□□□□□ -0.62
PRPF18-202ENST00000378572 NOTCH1P46531 2555 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 LINC00854A0A1B0GVQ3 168 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 TMEM82A0PJX8 343 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 ZNF736B4DX44 427 aaPredicted RBP11.19□□□□□ -0.62
PRPF18-202ENST00000378572 AMY2BP19961 511 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 OR3A1P47881 315 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 STEAP1BQ6NZ63 245 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 ZNF880Q6PDB4 577 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 ZNF497Q6ZNH5 498 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 MOB1BQ7L9L4 216 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 BEST4Q8NFU0 473 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 OR5R1Q8NH85 324 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 MRPL30Q8TCC3 161 aaKnown RBP11.19□□□□□ -0.62
PRPF18-202ENST00000378572 GAFA1Q96PS6 74 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 HDHD3Q9BSH5 251 aaPredicted RBP11.19□□□□□ -0.62
PRPF18-202ENST00000378572 FAM234AQ9H0X4 552 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 WNK1Q9H4A3 2382 aa11.19□□□□□ -0.62
PRPF18-202ENST00000378572 K7N7A8 449 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 HSPB6O14558 160 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 CD3DP04234 171 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 RFX2P48378 723 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 TAS2R46P59540 309 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 MEF2DQ14814 521 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 SLC35E4Q6ICL7 350 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 OR5D13Q8NGL4 314 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 OR4C16Q8NGL9 310 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 PLPPR1Q8TBJ4 325 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 NCOR1P1Q9H4R4 102 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 ZNF286AQ9HBT8 521 aa11.18□□□□□ -0.62
PRPF18-202ENST00000378572 MGAT4AQ9UM21 535 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms