RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 BCL2L14Q9BZR8 327 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 PARP11Q9NR21 331 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 TREM2Q9NZC2 230 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 DMXL2Q8TDJ6 3036 aa16.2■□□□□ 0.18
PCDHA4-201ENST00000378125 RNASEK-C17orf49H0YIS7 233 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 M0R1B8 84 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 WRBO00258 174 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 IGKV1-39P01597 117 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 IGKV1D-39P04432 117 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 MSMPQ1L6U9 139 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 VHLLQ6RSH7 139 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 FIP1L1Q6UN15 594 aaKnown RBP16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 Q6ZRM9 215 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 MOB1BQ7L9L4 216 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 ODF3L1Q8IXM7 274 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 OR2Z1Q8NG97 314 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 OR52L2PQ8NGH6 319 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 TMEM171Q8WVE6 324 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 ARV1Q9H2C2 271 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 HES4Q9HCC6 221 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 FAM215AQ9Y5M1 114 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 DIDO1Q9BTC0 2240 aaKnown RBP16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 IGLV1-44P01699 117 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 SPP1P10451 314 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 GABRA2P47869 451 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 CAMLGP49069 296 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 F2RL1P55085 397 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 ID3Q02535 119 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 MIDNQ504T8 468 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 ACP7Q6ZNF0 438 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 OR5C1Q8NGR4 320 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 MRGPRDQ8TDS7 321 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 S100PBPQ96BU1 408 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 LYRM2Q9NU23 88 aaPredicted RBP16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 MBNL3Q9NUK0 354 aaKnown RBP16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 SMG1Q96Q15 3661 aaKnown RBP16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 GVINP1Q7Z2Y8 2422 aa16.19■□□□□ 0.18
PCDHA4-201ENST00000378125 CADP27708 2225 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 OR2B11Q5JQS5 317 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 ZNF474Q6S9Z5 364 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 PLEKHF2Q9H8W4 249 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 WIPI2Q9Y4P8 454 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 CACNA1DQ01668 2161 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 MUC6Q6W4X9 2439 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 MBD3L4A6NDZ8 208 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 MBD3L3A6NE82 208 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 MBD3L5A6NJ08 208 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 NUDT19A8MXV4 375 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 C12orf77C9JDV5 145 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 HEXAP06865 529 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 SEC11BP0C7V7 166 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 DYNLT3P51808 116 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 HMGN3Q15651 99 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 SVBPQ8N300 66 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 ZNF808Q8N4W9 903 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 MBD3L2Q8NHZ7 208 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 KCNIP1Q9NZI2 227 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 SLC25A15Q9Y619 301 aa16.18■□□□□ 0.18
PCDHA4-201ENST00000378125 TMEM30CPA0ZSE6 113 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 TSPAN15O95858 294 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 SFTA3P0C7M3 94 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 DANCRP0C864 163 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 COL10A1Q03692 680 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 P2RY6Q15077 328 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 BEND4Q6ZU67 534 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 DRAM1Q8N682 238 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 RBMXL3Q8N7X1 1067 aaKnown RBP16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 COQ2Q96H96 371 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 CHD3Q12873 2000 aaKnown RBP16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 IGHV3-43A0A0B4J1X8 118 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 DUXBA0A1W2PPF3 345 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 CLEC18AA5D8T8 446 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 NPIPB11E5RHQ5 1161 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 IGHV3-43DP0DP04 118 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 KITLGP21583 273 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 IL2RGP31785 369 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 GLIPR1P48060 266 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 RTP5Q14D33 572 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 SPRNQ5BIV9 151 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 SHEQ5VZ18 495 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 CLEC18CQ8NCF0 446 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 RFESDQ8TAC1 157 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 LRRC29Q8WV35 223 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 DCTN5Q9BTE1 182 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 ABHD14AQ9BUJ0 271 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 CACNG5Q9UF02 275 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 CACFD1Q9UGQ2 172 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 BSNQ9UPA5 3926 aa16.17■□□□□ 0.18
PCDHA4-201ENST00000378125 ANKRD11Q6UB99 2663 aaPredicted RBP16.16■□□□□ 0.18
PCDHA4-201ENST00000378125 NPBWR1P48145 328 aa16.16■□□□□ 0.18
PCDHA4-201ENST00000378125 PAX9P55771 341 aa16.16■□□□□ 0.18
PCDHA4-201ENST00000378125 LTC4SQ16873 150 aa16.16■□□□□ 0.18
PCDHA4-201ENST00000378125 Q6ZS92 163 aa16.16■□□□□ 0.18
PCDHA4-201ENST00000378125 CBLN2Q8IUK8 224 aa16.16■□□□□ 0.18
PCDHA4-201ENST00000378125 IGKV1-5P01602 117 aa16.16■□□□□ 0.18
PCDHA4-201ENST00000378125 SSTR5P35346 364 aa16.16■□□□□ 0.18
PCDHA4-201ENST00000378125 NUBP1P53384 320 aa16.16■□□□□ 0.18
PCDHA4-201ENST00000378125 TMEM267Q0VDI3 215 aaPredicted RBP16.16■□□□□ 0.18
PCDHA4-201ENST00000378125 ZNF585BQ52M93 769 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms