RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 WISP3O95389 354 aaPredicted RBP10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 ADRA2AP08913 450 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 IL11P20809 199 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 SRD5A2P31213 254 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 CD81P60033 236 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 RCC2Q9P258 522 aaKnown RBP10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 LGALS7P47929 136 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 OPN3Q9H1Y3 402 aaPredicted RBP10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 SCN9AQ15858 1988 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 TRAV39A0A0B4J263 110 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 SLC35E3Q7Z769 313 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 NRIP2Q9BQI9 281 aa10.47□□□□□ -0.73
PCDHA9-201ENST00000378122 IGKV1D-16P01601 117 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 BRS3P32247 399 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 PSMB2P49721 201 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 PRRX1P54821 245 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 HIST3H3Q16695 136 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 ZNF385CQ66K41 422 aaPredicted RBP10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 ZFP64Q9NPA5 681 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 C21orf140B9A014 251 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 NMBP08949 121 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 MMP9P14780 707 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 ATP6V0CP27449 155 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 ABLIM2Q6H8Q1 611 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 FDX2Q6P4F2 183 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 RBPMS2Q6ZRY4 209 aaKnown RBP10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 TMEM52Q8NDY8 209 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 OR2H1Q9GZK4 316 aa10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 ZNF552Q9H707 407 aaPredicted RBP10.46□□□□□ -0.73
PCDHA9-201ENST00000378122 A0A1W2PN81 502 aa10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 EIF3GO75821 320 aaKnown RBP eCLIP10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 PET117Q6UWS5 81 aa10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 DIRC3C9JPN6 131 aa10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 NAT2P11245 290 aa10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 ZNF660Q6AZW8 331 aaPredicted RBP10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 PUSL1Q8N0Z8 303 aaKnown RBP10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 OR4S2Q8NH73 311 aa10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 CKAP5Q14008 2032 aa10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 CXorf65A6NEN9 183 aa10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 PRSS1P07477 247 aa10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 SEC11BP0C7V7 166 aa10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 DGAT2L7PQ6IED9 249 aa10.46□□□□□ -0.74
PCDHA9-201ENST00000378122 TGIF2-C20orf24A0A0A6YYL0 155 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 H3BVH4 76 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 RPL36A-HNRNPH2H7BZ11 118 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 RRN3P1Q2M238 152 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 SLC35E4Q6ICL7 350 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 GHITMQ9H3K2 345 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 SEBOXQ9HB31 216 aaPredicted RBP10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 CLN8Q9UBY8 286 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 C5orf52A6NGY3 159 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 PTP4A3O75365 173 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 CD99P14209 185 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 PRSS53Q2L4Q9 553 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 CYB561D1Q8N8Q1 229 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 FAM181AQ8N9Y4 354 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 OR8A1Q8NGG7 326 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 MPC1Q9Y5U8 109 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 A0A1W2PPE3 182 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 MS4A18H0YCH9 400 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 DEDDO75618 318 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 P01737 135 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 TRGC2P03986 189 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 LSM6P62312 80 aaKnown RBP10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 MS4A18Q3C1V0 323 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 CENPVQ7Z7K6 275 aaPredicted RBP10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 TMEM116Q8NCL8 245 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 QSER1Q2KHR3 1735 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 FOXO1Q12778 655 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 FAM157CP0CG43 387 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 ZNF658BQ4V348 819 aaPredicted RBP10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 DCAF10Q5QP82 559 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 EIF4E3Q8N5X7 224 aaKnown RBP10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 TMEM251Q8N6I4 163 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 C10orf35Q96D05 121 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 UCN2Q96RP3 112 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 PLXNB2O15031 1838 aa10.45□□□□□ -0.74
PCDHA9-201ENST00000378122 CFDP00746 253 aaPredicted RBP10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 RASL10BQ96S79 203 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 HSPB8Q9UJY1 196 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 AMMECR1Q9Y4X0 333 aaPredicted RBP10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 HOGA1Q86XE5 327 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 LINC00518Q8N0U6 118 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 RAB24Q969Q5 203 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 LOXL4Q96JB6 756 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 RNF24Q9Y225 148 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 ADAMTS7Q9UKP4 1686 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 hADV38S2A0JD32 116 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 A6NDN8 102 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 HELTA6NFD8 242 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 CXorf1O96002 111 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 SPATA45Q537H7 98 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 GPX7Q96SL4 187 aaPredicted RBP10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 CDIPTO14735 213 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 WNT5AP41221 380 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 MRPS11P82912 194 aaKnown RBP10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 CSRP2Q16527 193 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 KHDC3LQ587J8 217 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 ZNF362Q5T0B9 420 aaPredicted RBP10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 OR4A47Q6IF82 309 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms