RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 CDH26Q8IXH8 852 aa15.1■□□□□ 0.01
CBWD3-204ENST00000377349 MS4A15Q8N5U1 240 aa15.1■□□□□ 0.01
CBWD3-204ENST00000377349 RTN4IP1Q8WWV3 396 aaPredicted RBP15.1■□□□□ 0.01
CBWD3-204ENST00000377349 UFD1Q92890 307 aa15.1■□□□□ 0.01
CBWD3-204ENST00000377349 P2RX4Q99571 388 aa15.1■□□□□ 0.01
CBWD3-204ENST00000377349 TAF9BQ9HBM6 251 aa15.1■□□□□ 0.01
CBWD3-204ENST00000377349 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.1■□□□□ 0.01
CBWD3-204ENST00000377349 NUDT19A8MXV4 375 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 H0YHG0 523 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 PDCD6O75340 191 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 HSD17B12Q53GQ0 312 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 C8orf86Q6ZUL3 223 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 C5orf24Q7Z6I8 188 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 TGIF2LXQ8IUE1 241 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 OR2T10Q8NGZ9 312 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 SETD6Q8TBK2 473 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 NRG4Q8WWG1 115 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 EAF1Q96JC9 268 aaPredicted RBP15.09■□□□□ 0.01
CBWD3-204ENST00000377349 NEDD4LQ96PU5 975 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 CHMP1AQ9HD42 196 aaPredicted RBP15.09■□□□□ 0.01
CBWD3-204ENST00000377349 OR2S2Q9NQN1 319 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 FAM90A10PA6NDY2 464 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 FAM90A7PA6NKC0 464 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 FAM90A23PA8MXZ1 464 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 GNMTQ14749 295 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 SIGIRRQ6IA17 410 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 TRAT1Q6PIZ9 186 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 FOXRED2Q8IWF2 684 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 LINC00311Q8N616 119 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 OR51D1Q8NGF3 324 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 OR52L2PQ8NGH6 319 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 TMEM59Q9BXS4 323 aa15.09■□□□□ 0.01
CBWD3-204ENST00000377349 DYNC2H1Q8NCM8 4307 aaKnown RBP15.08■□□□□ 0
CBWD3-204ENST00000377349 ERICH4A6NGS2 130 aa15.08■□□□□ 0
CBWD3-204ENST00000377349 ZNF736B4DX44 427 aaPredicted RBP15.08■□□□□ 0
CBWD3-204ENST00000377349 FGF16O43320 207 aa15.08■□□□□ 0
CBWD3-204ENST00000377349 PPP1CCP36873 323 aaKnown RBP15.08■□□□□ 0
CBWD3-204ENST00000377349 SLC35B1P78383 322 aa15.08■□□□□ 0
CBWD3-204ENST00000377349 CD69Q07108 199 aa15.08■□□□□ 0
CBWD3-204ENST00000377349 LRRTM1Q86UE6 522 aa15.08■□□□□ 0
CBWD3-204ENST00000377349 MRPL30Q8TCC3 161 aaKnown RBP15.08■□□□□ 0
CBWD3-204ENST00000377349 CHPT1Q8WUD6 406 aa15.08■□□□□ 0
CBWD3-204ENST00000377349 GPR61Q9BZJ8 451 aa15.08■□□□□ 0
CBWD3-204ENST00000377349 GHRLQ9UBU3 117 aa15.08■□□□□ 0
CBWD3-204ENST00000377349 LSM2Q9Y333 95 aaKnown RBP15.08■□□□□ 0
CBWD3-204ENST00000377349 TPRKBQ9Y3C4 175 aa15.08■□□□□ 0
CBWD3-204ENST00000377349 RYR2Q92736 4967 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 LINC01548A6NM66 108 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 IGHG2P01859 326 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 UBBP0CG47 229 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 ZNF134P52741 427 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 GP2P55259 537 aaKnown RBP15.07■□□□□ 0
CBWD3-204ENST00000377349 P2RY14Q15391 338 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 CT45A1Q5HYN5 189 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 SLC25A48Q6ZT89 311 aaKnown RBP15.07■□□□□ 0
CBWD3-204ENST00000377349 C6orf201Q7Z4U5 140 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 LYPD6Q86Y78 171 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 IZUMO1Q8IYV9 350 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 CT45A3Q8NHU0 189 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 IL1F10Q8WWZ1 152 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 WWC2-AS2Q96NR7 200 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 RASL11BQ9BPW5 248 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 SULT4A1Q9BR01 284 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 NICN1Q9BSH3 213 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 FAAP24Q9BTP7 215 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 PLGRKTQ9HBL7 147 aa15.07■□□□□ 0
CBWD3-204ENST00000377349 RGS10O43665 173 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 CA11O75493 328 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 MOSP00540 346 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 SRMP19623 302 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 HTR2CP28335 458 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 SLC6A1P30531 599 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 MYCNOSP40205 109 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 RPS25P62851 125 aaKnown RBP15.06■□□□□ 0
CBWD3-204ENST00000377349 C8orf31Q8N9H6 132 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 ZNF439Q8NDP4 499 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 KLHL30-AS1Q8NEE0 82 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 DPF1Q92782 380 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 ABHD14AQ9BUJ0 271 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 ZFP57Q9NU63 452 aa15.06■□□□□ 0
CBWD3-204ENST00000377349 TXNL1O43396 289 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 SC5DO75845 299 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 MYF6P23409 242 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 GPR12P47775 334 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 RAB25P57735 213 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 RPS27AP62979 156 aaKnown RBP15.05■□□□□ -0
CBWD3-204ENST00000377349 EBI3Q14213 229 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 TMEM30BQ3MIR4 351 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 RNLSQ5VYX0 342 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 UNQ9370/PRO34162Q6UXP9 181 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 STPG2Q8N412 459 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 PHYHIPQ92561 330 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 DUX3Q96PT4 197 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 MCRIP2Q9BUT9 160 aaKnown RBP15.05■□□□□ -0
CBWD3-204ENST00000377349 ABRACLQ9P1F3 81 aa15.05■□□□□ -0
CBWD3-204ENST00000377349 GLAP06280 429 aa15.04■□□□□ -0
CBWD3-204ENST00000377349 SLC2A2P11168 524 aaPredicted RBP15.04■□□□□ -0
CBWD3-204ENST00000377349 CHATP28329 748 aa15.04■□□□□ -0
CBWD3-204ENST00000377349 CD1BP29016 333 aa15.04■□□□□ -0
CBWD3-204ENST00000377349 Q3ZCU0 254 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms