RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 MZT2BQ6NZ67 158 aa18.82■□□□□ 0.6
HLA-C-202ENST00000376237 YPEL2Q96QA6 119 aa18.82■□□□□ 0.6
HLA-C-202ENST00000376237 METTL8Q9H825 291 aaKnown RBP18.82■□□□□ 0.6
HLA-C-202ENST00000376237 GFOD1Q9NXC2 390 aa18.82■□□□□ 0.6
HLA-C-202ENST00000376237 SLC2A8Q9NY64 477 aa18.82■□□□□ 0.6
HLA-C-202ENST00000376237 SCP2D1Q9UJQ7 156 aa18.82■□□□□ 0.6
HLA-C-202ENST00000376237 CCDC168Q8NDH2 2452 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 ZNF735P0CB33 412 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 CEACAM6P40199 344 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 ERVFRD-1P60508 538 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 Q3ZCU0 254 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 LY6G6FQ5SQ64 297 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 PRAMEF5Q5TYX0 476 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 ZNF782Q6ZMW2 699 aaPredicted RBP18.81■□□□□ 0.6
HLA-C-202ENST00000376237 OR52L2PQ8NGH6 319 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 OR56B4Q8NH76 319 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 SLC6A7Q99884 636 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 PRRT1Q99946 306 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 SESN1Q9Y6P5 492 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 KIAA2026Q5HYC2 2103 aa18.81■□□□□ 0.6
HLA-C-202ENST00000376237 FCGR2CP31995 323 aa18.8■□□□□ 0.6
HLA-C-202ENST00000376237 LTC4SQ16873 150 aa18.8■□□□□ 0.6
HLA-C-202ENST00000376237 METTL11BQ5VVY1 283 aa18.8■□□□□ 0.6
HLA-C-202ENST00000376237 FAAP20Q6NZ36 180 aa18.8■□□□□ 0.6
HLA-C-202ENST00000376237 H1FOOQ8IZA3 346 aaPredicted RBP18.8■□□□□ 0.6
HLA-C-202ENST00000376237 POC5Q8NA72 575 aa18.8■□□□□ 0.6
HLA-C-202ENST00000376237 MAPK1IP1LQ8NDC0 245 aa18.8■□□□□ 0.6
HLA-C-202ENST00000376237 C11orf54Q9H0W9 315 aaPredicted RBP18.8■□□□□ 0.6
HLA-C-202ENST00000376237 UNKLQ9H9P5 680 aaKnown RBP18.8■□□□□ 0.6
HLA-C-202ENST00000376237 OR1A1Q9P1Q5 309 aa18.8■□□□□ 0.6
HLA-C-202ENST00000376237 ZNF69Q9UC07 566 aa18.8■□□□□ 0.6
HLA-C-202ENST00000376237 A0A087X0M5 115 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 A0A1B0GX30 115 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 MMP23AO75900 390 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 PRTN3P24158 256 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 NFYBP25208 207 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 MORN2Q502X0 79 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 ZNF660Q6AZW8 331 aaPredicted RBP18.79■□□□□ 0.6
HLA-C-202ENST00000376237 Q8N7P7 452 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 OR51S1Q8NGJ8 323 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 FAM216AQ8WUB2 273 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 EDARADDQ8WWZ3 215 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 TMEM186Q96B77 213 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 MSI2Q96DH6 328 aaKnown RBP18.79■□□□□ 0.6
HLA-C-202ENST00000376237 RDH8Q9NYR8 311 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 TUSC2O75896 110 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 IGHV4-31P0DP07 118 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 NFYAP23511 347 aaPredicted RBP18.79■□□□□ 0.6
HLA-C-202ENST00000376237 PAX8Q06710 450 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 DCAF12L2Q5VW00 463 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 GLCCI1Q86VQ1 547 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 TERB2Q8NHR7 220 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 ZNF2Q9BSG1 426 aaPredicted RBP18.79■□□□□ 0.6
HLA-C-202ENST00000376237 OR2W1Q9Y3N9 320 aa18.79■□□□□ 0.6
HLA-C-202ENST00000376237 NOTCH2Q04721 2471 aa18.78■□□□□ 0.6
HLA-C-202ENST00000376237 IGHV3-43A0A0B4J1X8 118 aa18.78■□□□□ 0.6
HLA-C-202ENST00000376237 ITGB1BP1O14713 200 aa18.78■□□□□ 0.6
HLA-C-202ENST00000376237 IGHV3-43DP0DP04 118 aa18.78■□□□□ 0.6
HLA-C-202ENST00000376237 PPP1CCP36873 323 aaKnown RBP18.78■□□□□ 0.6
HLA-C-202ENST00000376237 SCGB2B2Q4G0G5 96 aa18.78■□□□□ 0.6
HLA-C-202ENST00000376237 CYB5R2Q6BCY4 276 aa18.78■□□□□ 0.6
HLA-C-202ENST00000376237 SIRPDQ9H106 197 aa18.78■□□□□ 0.6
HLA-C-202ENST00000376237 TMEM133Q9H2Q1 129 aa18.78■□□□□ 0.6
HLA-C-202ENST00000376237 HEXA-AS1Q9H8Q6 139 aa18.78■□□□□ 0.6
HLA-C-202ENST00000376237 HIF1ANQ9NWT6 349 aa18.78■□□□□ 0.6
HLA-C-202ENST00000376237 PPYP01298 95 aa18.77■□□□□ 0.6
HLA-C-202ENST00000376237 CD34P28906 385 aa18.77■□□□□ 0.6
HLA-C-202ENST00000376237 ECI1P42126 302 aa18.77■□□□□ 0.6
HLA-C-202ENST00000376237 GNMTQ14749 295 aa18.77■□□□□ 0.6
HLA-C-202ENST00000376237 LHFPL1Q86WI0 220 aa18.77■□□□□ 0.6
HLA-C-202ENST00000376237 OR10V1Q8NGI7 309 aa18.77■□□□□ 0.6
HLA-C-202ENST00000376237 TOX4O94842 621 aa18.76■□□□□ 0.59
HLA-C-202ENST00000376237 TGFAP01135 160 aa18.76■□□□□ 0.59
HLA-C-202ENST00000376237 MMP9P14780 707 aa18.76■□□□□ 0.59
HLA-C-202ENST00000376237 SLC6A1P30531 599 aa18.76■□□□□ 0.59
HLA-C-202ENST00000376237 HERV-K104P61576 105 aa18.76■□□□□ 0.59
HLA-C-202ENST00000376237 IDO2Q6ZQW0 420 aa18.76■□□□□ 0.59
HLA-C-202ENST00000376237 C8orf31Q8N9H6 132 aa18.76■□□□□ 0.59
HLA-C-202ENST00000376237 SLC25A21Q9BQT8 299 aaPredicted RBP18.76■□□□□ 0.59
HLA-C-202ENST00000376237 TMPRSS13Q9BYE2 586 aa18.76■□□□□ 0.59
HLA-C-202ENST00000376237 CSMD1Q96PZ7 3565 aa18.76■□□□□ 0.59
HLA-C-202ENST00000376237 FAM240BA0A1B0GVZ2 78 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 FAM172BPA6NC97 362 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 J3QLI3 93 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 AADACP22760 399 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 BTCP35070 178 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 LUMP51884 338 aaPredicted RBP18.75■□□□□ 0.59
HLA-C-202ENST00000376237 CIARTQ8N365 385 aaPredicted RBP18.75■□□□□ 0.59
HLA-C-202ENST00000376237 OR2AK2Q8NG84 335 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 OR13D1Q8NGV5 346 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 MOB3AQ96BX8 217 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 SUCNR1Q9BXA5 334 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 DPAGT1Q9H3H5 408 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 COPZ2Q9P299 210 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 MED13LQ71F56 2210 aa18.75■□□□□ 0.59
HLA-C-202ENST00000376237 PTTG1O95997 202 aa18.74■□□□□ 0.59
HLA-C-202ENST00000376237 RAB7AP51149 207 aa18.74■□□□□ 0.59
HLA-C-202ENST00000376237 RBMS2Q15434 407 aaKnown RBP18.74■□□□□ 0.59
HLA-C-202ENST00000376237 RGS21Q2M5E4 152 aa18.74■□□□□ 0.59
HLA-C-202ENST00000376237 AADACL3Q5VUY0 350 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms