RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 ZNF738Q8NE65 137 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 KLK15Q9H2R5 256 aa11.95□□□□□ -0.5
COL4A1-201ENST00000375820 C16orf97H3BN30 126 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 UPK3AO75631 287 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 NAT2P11245 290 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 PRNDQ9UKY0 176 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 VSIG8P0DPA2 414 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 ID1P41134 155 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 GPR61Q9BZJ8 451 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 CA2P00918 260 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 TM4SF20Q53R12 229 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 WNT2BQ93097 391 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 IGHV3-48P01763 117 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 RELBQ01201 579 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 OR4B1Q8NGF8 309 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 MRPL30Q8TCC3 161 aaKnown RBP11.94□□□□□ -0.5
COL4A1-201ENST00000375820 PIPOXQ9P0Z9 390 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 OGG1O15527 345 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 RPLP1P05386 114 aaKnown RBP11.94□□□□□ -0.5
COL4A1-201ENST00000375820 PRDX2P32119 198 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 SLC25A42Q86VD7 318 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 GHITMQ9H3K2 345 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 RPL36A-HNRNPH2H7BZ11 118 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 CD74P04233 296 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 TEX30Q5JUR7 227 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 AMMECR1LQ6DCA0 310 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 ASCL5Q7RTU5 278 aa11.94□□□□□ -0.5
COL4A1-201ENST00000375820 KIF13AQ9H1H9 1805 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 PPIAL4EA0A075B759 164 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 DIRC3C9JPN6 131 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 PPIAL4DF5H284 164 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 ISLRO14498 428 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 PPIAL4FP0DN26 164 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 TMEM171Q8WVE6 324 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 HMSDA8MTL9 139 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 TMEM127O75204 238 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 LIFP15018 202 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 GZMHP20718 246 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 OR1L8Q8NGR8 309 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 PLAC1Q9HBJ0 212 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 WIPI2Q9Y4P8 454 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 BGLAPP02818 100 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 ATP6V0CP27449 155 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 COTL1Q14019 142 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 METTL1Q9UBP6 276 aaKnown RBP11.93□□□□□ -0.5
COL4A1-201ENST00000375820 PDE6DO43924 150 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 OR2A4O95047 310 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 VDAC1P21796 283 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 PGLYRP4Q96LB8 373 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 OR2A7Q96R45 310 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 F11RQ9Y624 299 aaKnown RBP11.93□□□□□ -0.5
COL4A1-201ENST00000375820 ITGB4P16144 1822 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 IGHV3-35A0A0C4DH35 117 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 TMEM189A5PLL7 270 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 J3QT63 122 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 CYB5R3P00387 301 aaPredicted RBP11.93□□□□□ -0.5
COL4A1-201ENST00000375820 GPR6P46095 362 aaPredicted RBP11.93□□□□□ -0.5
COL4A1-201ENST00000375820 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 ZNF343Q6P1L6 599 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 NEU1Q99519 415 aa11.93□□□□□ -0.5
COL4A1-201ENST00000375820 RALYQ9UKM9 306 aaKnown RBP11.93□□□□□ -0.5
COL4A1-201ENST00000375820 ZNF735P0CB33 412 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 PEBP1P30086 187 aaKnown RBP11.92□□□□□ -0.5
COL4A1-201ENST00000375820 MFAP2P55001 183 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 FAM3BP58499 235 aaPredicted RBP11.92□□□□□ -0.5
COL4A1-201ENST00000375820 FXYD3Q14802 87 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 DCAF10Q5QP82 559 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 WFIKKN1Q96NZ8 548 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 GLRX2Q9NS18 164 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 A0A1W2PP11 408 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 DEDDO75618 318 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 HINT1P49773 126 aaPredicted RBP11.92□□□□□ -0.5
COL4A1-201ENST00000375820 LSM6P62312 80 aaKnown RBP11.92□□□□□ -0.5
COL4A1-201ENST00000375820 HERPUD1Q15011 391 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 C9orf62Q8N4C0 152 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 OR2V2Q96R30 315 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 METTL26Q96S19 204 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 GPA33Q99795 319 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 A6NDN8 102 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 KLF9Q13886 244 aaPredicted RBP11.92□□□□□ -0.5
COL4A1-201ENST00000375820 CD300LDQ6UXZ3 194 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 WDR34Q96EX3 536 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 LMX1BO60663 402 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 OR10J1P30954 320 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 OR4A47Q6IF82 309 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 STXBP6Q8NFX7 210 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 ANGPTL4Q9BY76 406 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 DNAJC13O75165 2243 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 CEACAM18A8MTB9 384 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 IGKV1D-16P01601 117 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 GALP22466 123 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 KIR3DL2P43630 455 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 HMGA2P52926 109 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 PNRC1Q12796 327 aaPredicted RBP11.92□□□□□ -0.5
COL4A1-201ENST00000375820 SF3B5Q9BWJ5 86 aaKnown RBP11.92□□□□□ -0.5
COL4A1-201ENST00000375820 MIOXQ9UGB7 285 aa11.92□□□□□ -0.5
COL4A1-201ENST00000375820 VSIG10L2P0DP72 767 aa11.91□□□□□ -0.5
COL4A1-201ENST00000375820 EBLN2Q6P2I7 272 aa11.91□□□□□ -0.5
COL4A1-201ENST00000375820 ZNF714Q96N38 554 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms