RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 H3BQ15 152 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 LYZL6O75951 148 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 PPYP01298 95 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 TRGC1P0CF51 173 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 LMO1P25800 156 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 IL2RGP31785 369 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 Q6ZS49 121 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 NEK7Q8TDX7 302 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 FRZBQ92765 325 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 SYT3Q9BQG1 590 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 UNKLQ9H9P5 680 aaKnown RBP11.89□□□□□ -0.51
MSH5-202ENST00000375740 GLRX2Q9NS18 164 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 FAM86C1Q9NVL1 165 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 LUZP4Q9P127 313 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 TUBD1Q9UJT1 453 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 SHANK1Q9Y566 2161 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 A0A1B0GWJ7 208 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 OR5B21A6NL26 309 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 UBE2NP61088 152 aaKnown RBP11.89□□□□□ -0.51
MSH5-202ENST00000375740 LIAT1Q6ZQX7 453 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 LYZL2Q7Z4W2 148 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 SUMF2Q8NBJ7 301 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 OR51I2Q9H344 312 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 ESPL1Q14674 2120 aa11.89□□□□□ -0.51
MSH5-202ENST00000375740 HS3ST1O14792 307 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 RHBDL1O75783 438 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 G0S2P27469 103 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 IDH3GP51553 393 aaPredicted RBP11.88□□□□□ -0.51
MSH5-202ENST00000375740 TGFBR3Q03167 851 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 SRSF7Q16629 238 aaKnown RBP eCLIP11.88□□□□□ -0.515e-6■■■□□ 17.5
MSH5-202ENST00000375740 DEFB109BQ30KR1 87 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 FAM214BQ7L5A3 538 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 C17orf78Q8N4C9 275 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 FAM213BQ8TBF2 198 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 C18orf12Q96KH6 178 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 ARV1Q9H2C2 271 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 MDKP21741 143 aaPredicted RBP11.88□□□□□ -0.51
MSH5-202ENST00000375740 NHLH2Q02577 135 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 IL24Q13007 206 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 TMEM182Q6ZP80 229 aaPredicted RBP11.88□□□□□ -0.51
MSH5-202ENST00000375740 FAM58AQ8N1B3 248 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 COMMD1Q8N668 190 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 LRTM2Q8N967 370 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 MSI2Q96DH6 328 aaKnown RBP11.88□□□□□ -0.51
MSH5-202ENST00000375740 OR2J1Q9GZK6 312 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 PLK3Q9H4B4 646 aa11.88□□□□□ -0.51
MSH5-202ENST00000375740 EP300Q09472 2414 aaPredicted RBP11.87□□□□□ -0.51
MSH5-202ENST00000375740 TRAV17A0A0B4J275 112 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 PHF1O43189 567 aaPredicted RBP11.87□□□□□ -0.51
MSH5-202ENST00000375740 DIRAS3O95661 229 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 SEC11BP0C7V7 166 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 GNRHRP30968 328 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 NOVA1P51513 510 aaKnown RBP11.87□□□□□ -0.51
MSH5-202ENST00000375740 ERVS71-1P61550 626 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 NKX6-1P78426 367 aaPredicted RBP11.87□□□□□ -0.51
MSH5-202ENST00000375740 DLK1P80370 383 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 GABRA6Q16445 453 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 FBXW12Q6X9E4 464 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 CNEP1R1Q8N9A8 125 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 CCDC71LQ8N9Z2 235 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 RDH5Q92781 318 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 PACRGQ96M98 296 aaPredicted RBP11.87□□□□□ -0.51
MSH5-202ENST00000375740 CDH20Q9HBT6 801 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 EREGO14944 169 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 SMPD2O60906 423 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 PAX1P15863 534 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 PPP1CBP62140 327 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 MRPL49Q13405 166 aaKnown RBP11.87□□□□□ -0.51
MSH5-202ENST00000375740 HERPUD1Q15011 391 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 LGI3Q8N145 548 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 ZNF664Q8N3J9 261 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 TP53RKQ96S44 253 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 MRPL37Q9BZE1 423 aaKnown RBP11.87□□□□□ -0.51
MSH5-202ENST00000375740 PKIBQ9C010 78 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 PTPRBP23467 1997 aa11.87□□□□□ -0.51
MSH5-202ENST00000375740 TRAV24A0A0B4J272 114 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 A8MWP6 167 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 TRDCB7Z8K6 153 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 MPPED1O15442 326 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 IFNA10P01566 189 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 MBPP02686 304 aaPredicted RBP11.86□□□□□ -0.51
MSH5-202ENST00000375740 TK1P04183 234 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 UBE2KP61086 200 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 C20orf204Q6ZNR8 217 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 HIST1H2BLQ99880 126 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 AQP7O14520 342 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 HSD17B6O14756 317 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 GUSBP1Q15486 140 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 ALKBH6Q3KRA9 238 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 Q6ZT83 130 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 WDR86Q86TI4 376 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 LINC00596Q86U02 117 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 C9orf106Q8NAJ2 232 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 TP53TG5Q9Y2B4 290 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 ATP23Q9Y6H3 246 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 ZNF318Q5VUA4 2279 aa11.86□□□□□ -0.51
MSH5-202ENST00000375740 IGKV1-6A0A0C4DH72 117 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 C3orf85A0A1B0GTC6 90 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 PTBP3O95758 552 aaKnown RBP11.85□□□□□ -0.51
MSH5-202ENST00000375740 KIR2DL2P43627 348 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms