RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SF3B5Q9BWJ5 86 aaKnown RBP5.66□□□□□ -1.5
SMC1A-202ENST00000375340 DOCK9Q9BZ29 2069 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 DANCRP0C864 163 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 OPRK1P41145 380 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 OR2M7Q8NG81 312 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 OR2T10Q8NGZ9 312 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 DTD1Q8TEA8 209 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 MOB3AQ96BX8 217 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 LYRM2Q9NU23 88 aaPredicted RBP5.65□□□□□ -1.5
SMC1A-202ENST00000375340 TRGV10A0A0A0MS01 117 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 TRAV38-1A0A0B4J264 116 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 C20orf202A1L168 122 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 OOEPA6NGQ2 149 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 HLA-GP17693 338 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 SCGB2A2Q13296 93 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 HSD17B10Q99714 261 aaKnown RBP5.65□□□□□ -1.5
SMC1A-202ENST00000375340 PCGF1Q9BSM1 259 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 CXXC4Q9H2H0 198 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 A0A1B0GU03 582 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 GALR2O43603 387 aaPredicted RBP5.65□□□□□ -1.5
SMC1A-202ENST00000375340 PGLYRP1O75594 196 aaPredicted RBP5.65□□□□□ -1.5
SMC1A-202ENST00000375340 IGKV3-11P04433 115 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 SUCLG1P53597 346 aaKnown RBP5.65□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF385CQ66K41 422 aaPredicted RBP5.65□□□□□ -1.5
SMC1A-202ENST00000375340 OR2Y1Q8NGV0 311 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 TMEM54Q969K7 222 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 LYZL4Q96KX0 146 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 IP6K3Q96PC2 410 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 SOX8P57073 446 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 RND3P61587 244 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 FOXO1Q12778 655 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 TTTY12Q9BZ98 90 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 DUXBA0A1W2PPF3 345 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 IGSF23A1L1A6 192 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF735P0CB33 412 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 CNN1P51911 297 aaKnown RBP5.65□□□□□ -1.5
SMC1A-202ENST00000375340 STUMQ69YW2 141 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 OR1B1Q8NGR6 318 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 ANAPC16Q96DE5 110 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 POM121L2Q96KW2 1035 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 GGACTQ9BVM4 153 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 ELOVL1Q9BW60 279 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 COMMD5Q9GZQ3 224 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF665Q9H7R5 613 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 RNF122Q9H9V4 155 aa5.65□□□□□ -1.5
SMC1A-202ENST00000375340 A0A1B0GV90 55 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 IER3P46695 156 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 SUB1P53999 127 aaKnown RBP eCLIP5.65□□□□□ -1.512e-9■■■■■ 50.3
SMC1A-202ENST00000375340 FAM3BP58499 235 aaPredicted RBP5.65□□□□□ -1.51
SMC1A-202ENST00000375340 DPPA3Q6W0C5 159 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 SLC25A40Q8TBP6 338 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 RNF126Q9BV68 326 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 WFDC1Q9HC57 220 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 SIRT7Q9NRC8 400 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 A0A1B0GTI1 187 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 CBY3A6NI87 242 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 NPIPB9F8W1W9 429 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 SNRPCP09234 159 aaKnown RBP5.65□□□□□ -1.51
SMC1A-202ENST00000375340 PGA5P0DJD9 388 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 USF1P22415 310 aaPredicted RBP5.65□□□□□ -1.51
SMC1A-202ENST00000375340 RNF144BQ7Z419 303 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 OR4P4Q8NGL7 312 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 GDF15Q99988 308 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 CFHR5Q9BXR6 569 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 ONECUT1Q9UBC0 465 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 TCAPO15273 167 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 IL3RAP26951 378 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 ERHP84090 104 aaKnown RBP5.65□□□□□ -1.51
SMC1A-202ENST00000375340 ALPK3Q96L96 1907 aa5.65□□□□□ -1.51
SMC1A-202ENST00000375340 H0Y980 276 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 GAPDHP04406 335 aaKnown RBP5.64□□□□□ -1.51
SMC1A-202ENST00000375340 TCTAP57738 103 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 NUFIP2Q7Z417 695 aaKnown RBP5.64□□□□□ -1.51
SMC1A-202ENST00000375340 RBP4P02753 201 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 FNDC7Q5VTL7 733 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 MRPL54Q6P161 138 aaKnown RBP5.64□□□□□ -1.51
SMC1A-202ENST00000375340 DEFB123Q8N688 67 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 OR4A4PQ8NGN8 299 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 GPR146Q96CH1 333 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 CTDSP1Q9GZU7 261 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 E9PQ18 207 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 ATXN7O15265 892 aaPredicted RBP5.64□□□□□ -1.51
SMC1A-202ENST00000375340 TOX3O15405 576 aaPredicted RBP5.64□□□□□ -1.51
SMC1A-202ENST00000375340 GDF9O60383 454 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 SLC25A5P05141 298 aaKnown RBP5.64□□□□□ -1.51
SMC1A-202ENST00000375340 COX6A1P12074 109 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 SLC35B1P78383 322 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 IGFBP7Q16270 282 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 TMEM183BQ1AE95 376 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 MOGAT3Q86VF5 341 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 BOD1Q96IK1 185 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 ABHD14AQ9BUJ0 271 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 GSN-AS1Q9NRJ2 163 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 TIMM9Q9Y5J7 89 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 CEACAM21Q3KPI0 293 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 BHLHA15Q7RTS1 189 aaPredicted RBP5.64□□□□□ -1.51
SMC1A-202ENST00000375340 TIPARPQ7Z3E1 657 aaKnown RBP5.64□□□□□ -1.51
SMC1A-202ENST00000375340 NHLRC2Q8NBF2 726 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 ABHD14BQ96IU4 210 aa5.64□□□□□ -1.51
SMC1A-202ENST00000375340 CARHSP1Q9Y2V2 147 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms