RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 FCARP24071 287 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 GGTLC2Q14390 218 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 C1orf185Q5T7R7 199 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 ADTRPQ96IZ2 230 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 PRDM14Q9GZV8 571 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 NEU3Q9UQ49 428 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 H3BQ15 152 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 ZNF770Q6IQ21 691 aaPredicted RBP12.51□□□□□ -0.41
TRAF1-201ENST00000373887 SLC35E3Q7Z769 313 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 ZNF519Q8TB69 540 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 SCN4AP35499 1836 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 XAF1Q6GPH4 301 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 PCGF1Q9BSM1 259 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 MS4A7Q9GZW8 240 aaPredicted RBP12.51□□□□□ -0.41
TRAF1-201ENST00000373887 ANXA10Q9UJ72 324 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 A1L4Q6 167 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 ID1P41134 155 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 PAFAH1B2P68402 229 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 KLRB1Q12918 225 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 LEUTXA8MZ59 168 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 EWSR1Q01844 656 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRAF1-201ENST00000373887 PIGYQ3MUY2 71 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 AMMECR1LQ6DCA0 310 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 ZCCHC14Q8WYQ9 949 aaKnown RBP12.5□□□□□ -0.41
TRAF1-201ENST00000373887 MIOXQ9UGB7 285 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 CES1P1Q9UKY3 287 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 LY75O60449 1722 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 SFTPCP11686 197 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 MESTQ5EB52 335 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 ZNF721Q8TF20 911 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 CLN8Q9UBY8 286 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 TRBV23-1A0A0A0MS06 115 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 NKX2-6A6NCS4 301 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 PDE6DO43924 150 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 ZFP36L2P47974 494 aaKnown RBP12.5□□□□□ -0.41
TRAF1-201ENST00000373887 HINT1P49773 126 aaPredicted RBP12.5□□□□□ -0.41
TRAF1-201ENST00000373887 LOXL3P58215 753 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 HERPUD1Q15011 391 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 TMEM171Q8WVE6 324 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 IGKV3OR2-268A0A0C4DH90 116 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 IZUMO4Q1ZYL8 232 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 GLRX2Q9NS18 164 aa12.5□□□□□ -0.41
TRAF1-201ENST00000373887 IGHV1-45A0A0A0MS14 117 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 C7orf77A4D0Y5 90 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 PSG2P11465 335 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 MMP9P14780 707 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 HIST1H1BP16401 226 aaKnown RBP12.49□□□□□ -0.41
TRAF1-201ENST00000373887 KIR3DL2P43630 455 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 CXorf1O96002 111 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 RRN3P1Q2M238 152 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 LGALSLQ3ZCW2 172 aaPredicted RBP12.49□□□□□ -0.41
TRAF1-201ENST00000373887 FAHD2BQ6P2I3 314 aaPredicted RBP12.49□□□□□ -0.41
TRAF1-201ENST00000373887 SLC25A40Q8TBP6 338 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 RAB24Q969Q5 203 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 ABHD1Q96SE0 405 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 PIPOXQ9P0Z9 390 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 CD81P60033 236 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 PKIAP61925 76 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 CD300CQ08708 224 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 BVESQ8NE79 360 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 OR6X1Q8NH79 312 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 GPR35Q9HC97 309 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 IL11P20809 199 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 FGF9P31371 208 aaPredicted RBP12.49□□□□□ -0.41
TRAF1-201ENST00000373887 GUCA2BQ16661 112 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 MDP1Q86V88 176 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 OR4D11Q8NGI4 311 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 SAP25Q8TEE9 199 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 FAM131CQ96AQ9 280 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 TDRD15B5MCY1 1934 aaKnown RBP12.49□□□□□ -0.41
TRAF1-201ENST00000373887 KCNMB1Q16558 191 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 WDFY1Q8IWB7 410 aa12.49□□□□□ -0.41
TRAF1-201ENST00000373887 MRM2Q9UI43 246 aaKnown RBP12.49□□□□□ -0.41
TRAF1-201ENST00000373887 RELBQ01201 579 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 NSUN5P2Q63ZY6 315 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 LYZL2Q7Z4W2 148 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 WDFY2Q96P53 400 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 RCC2Q9P258 522 aaKnown RBP12.48□□□□□ -0.41
TRAF1-201ENST00000373887 HIGD1AQ9Y241 93 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 OR8G5Q8NG78 346 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 ST6GAL2Q96JF0 529 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 SLC52A3Q9NQ40 469 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 FOXJ2Q9P0K8 574 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 OR51B2Q9Y5P1 312 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 HMSDA8MTL9 139 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 OTX1P32242 354 aaPredicted RBP12.48□□□□□ -0.41
TRAF1-201ENST00000373887 AESQ08117 197 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 FAM216AQ8WUB2 273 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 WDR54Q9H977 334 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 MPC1Q9Y5U8 109 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 SPAG17Q6Q759 2223 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 PRR19A6NJB7 356 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 F12P00748 615 aaPredicted RBP12.48□□□□□ -0.41
TRAF1-201ENST00000373887 CTSBP07858 339 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 PGA4P0DJD7 388 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 PGA5P0DJD9 388 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 PLP1P60201 277 aa12.48□□□□□ -0.41
TRAF1-201ENST00000373887 CXCL3P19876 107 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 MMDQ15546 238 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms