RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 JOSD1Q15040 202 aaPredicted RBP11.71□□□□□ -0.53
USP49-201ENST00000373006 HIST1H2AAQ96QV6 131 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 DIRC2Q96SL1 478 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 TMEM242Q9NWH2 141 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 TRBV24-1A0A075B6N3 115 aa11.71□□□□□ -0.54
USP49-201ENST00000373006 RTP5Q14D33 572 aa11.71□□□□□ -0.54
USP49-201ENST00000373006 WDR74Q6RFH5 385 aaPredicted RBP11.71□□□□□ -0.54
USP49-201ENST00000373006 OR1K1Q8NGR3 316 aa11.71□□□□□ -0.54
USP49-201ENST00000373006 OR2V1Q8NHB1 315 aa11.71□□□□□ -0.54
USP49-201ENST00000373006 RPUSD4Q96CM3 377 aaKnown RBP11.71□□□□□ -0.54
USP49-201ENST00000373006 TMEM38BQ9NVV0 291 aa11.71□□□□□ -0.54
USP49-201ENST00000373006 CRIM1Q9NZV1 1036 aa11.71□□□□□ -0.54
USP49-201ENST00000373006 TRAV1-1A0A0B4J248 108 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 CLEC18AA5D8T8 446 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 SERPINE2P07093 398 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 CCL2P13500 99 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 TMEM11P17152 192 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 C16orf82Q7Z2V1 217 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 KMT5CQ86Y97 462 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 CLEC18CQ8NCF0 446 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 OR10G4Q8NGN3 311 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 OR5R1Q8NH85 324 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 IL22RA2Q969J5 263 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 SDSLQ96GA7 329 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 SMIM7Q9BQ49 75 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 CDH20Q9HBT6 801 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 IL36GQ9NZH8 169 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 ZNF816-ZNF321PA0A0X1KG74 233 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 AQP7O14520 342 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 IL18BPO95998 194 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 GZMHP20718 246 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 FKBP2P26885 142 aaKnown RBP11.7□□□□□ -0.54
USP49-201ENST00000373006 GPM6AP51674 278 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 TESK1Q15569 626 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 CEACAM16Q2WEN9 425 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 SLC23A3Q6PIS1 610 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 DPPA3Q6W0C5 159 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 C20orf204Q6ZNR8 217 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 TDHQ8IZJ6 230 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 IL1F10Q8WWZ1 152 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 MSL2Q9HCI7 577 aa11.7□□□□□ -0.54
USP49-201ENST00000373006 NCOR1O75376 2440 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 OR6C6A6NF89 314 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 DLEU1O43261 78 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 SELEP16581 610 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 CD81P60033 236 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 YRDCQ86U90 279 aaKnown RBP11.69□□□□□ -0.54
USP49-201ENST00000373006 OR1P1Q8NH06 330 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 AURKAIP1Q9NWT8 199 aaPredicted RBP11.69□□□□□ -0.54
USP49-201ENST00000373006 HS3ST1O14792 307 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 F2RP25116 425 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 AARDQ4LEZ3 155 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 C9orf135Q5VTT2 229 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 GUSBP11Q6P575 273 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 OR5D13Q8NGL4 314 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 ABHD14BQ96IU4 210 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 OR2H1Q9GZK4 316 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 CACNG5Q9UF02 275 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 RARRES3Q9UL19 164 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 PAM16Q9Y3D7 125 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 TRAV39A0A0B4J263 110 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 SIAH2O43255 324 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 ZNF737O75373 536 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 CST2P09228 141 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 LIFP15018 202 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
USP49-201ENST00000373006 OR3A1P47881 315 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 PRR18Q8N4B5 295 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 UBALD1Q8TB05 177 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 RAB24Q969Q5 203 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 FOXB1Q99853 325 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 PCGF1Q9BSM1 259 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 PROK2Q9HC23 129 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 VAX2Q9UIW0 290 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 ERRFI1Q9UJM3 462 aaPredicted RBP11.69□□□□□ -0.54
USP49-201ENST00000373006 FUT9Q9Y231 359 aa11.69□□□□□ -0.54
USP49-201ENST00000373006 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 KIAA1324LA8MWY0 1029 aaPredicted RBP11.68□□□□□ -0.54
USP49-201ENST00000373006 DVL1O14640 695 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 NAPSAO96009 420 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 MDH2P40926 338 aaKnown RBP11.68□□□□□ -0.54
USP49-201ENST00000373006 DNLZQ5SXM8 178 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 AAED1Q7RTV5 226 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 ZNF488Q96MN9 340 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 SRD5A3Q9H8P0 318 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 PSENENQ9NZ42 101 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 PRSS50Q9UI38 385 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 TRAV34A0A0B4J273 112 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 H0Y980 276 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 IRF2P14316 349 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 DSCR4P56555 118 aaPredicted RBP11.68□□□□□ -0.54
USP49-201ENST00000373006 LBHQ53QV2 105 aaPredicted RBP11.68□□□□□ -0.54
USP49-201ENST00000373006 SPANXN5Q5MJ07 72 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 ERASQ7Z444 233 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 OR56B2PQ8NGI1 322 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 RDH5Q92781 318 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 LHX4Q969G2 390 aa11.68□□□□□ -0.54
USP49-201ENST00000373006 A0A0U1RQK1 487 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 TUSC2O75896 110 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms