RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 POC1AQ8NBT0 407 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 CHST4Q8NCG5 386 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 OR52I2Q8NH67 350 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 LRRC29Q8WV35 223 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 LINC00476Q8WZB0 136 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 YIPF5Q969M3 257 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 RNF183Q96D59 192 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 ARHGAP5-AS1Q96IT6 56 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 TRAF4Q9BUZ4 470 aaPredicted RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 PECRQ9BY49 303 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 PLEKHF2Q9H8W4 249 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 RAB9BQ9NP90 201 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 SLC35D1Q9NTN3 355 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 ST3GAL6Q9Y274 331 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 CACNG2Q9Y698 323 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 USF3Q68DE3 2245 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 SPG11Q96JI7 2443 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 A0A0A6YYH2 397 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 METTL21EPA6NDL7 271 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 TMEM235A6NFC5 223 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 A6NJ64 397 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 LYNX1G3V0Z9 82 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 MFNGO00587 321 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 CTDSPLO15194 276 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 GSTZ1O43708 216 aaPredicted RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 UPK1BO75841 260 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 CYB5AP00167 134 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 MELTFP08582 738 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 CD3GP09693 182 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 LYNX1P0DP58 116 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 IL7P13232 177 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 HIST1H1DP16402 221 aaKnown RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 NDUFB7P17568 137 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 PRKACAP17612 351 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 COL8A2P25067 703 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 CHATP28329 748 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 TALDO1P37837 337 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 P2RX3P56373 397 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 SSTP61278 116 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 OXA1LQ15070 435 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 TRIM16LQ309B1 348 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 NHLRC3Q5JS37 347 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 DCAF12L2Q5VW00 463 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 BAIAP2L2Q6UXY1 529 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 ACP7Q6ZNF0 438 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 Q6ZTK2 550 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 C6orf201Q7Z4U5 140 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 PEG10Q86TG7 708 aaKnown RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 Q8N402 240 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 BOLLQ8N9W6 283 aaKnown RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 C19orf18Q8NEA5 215 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 OR5T2Q8NGG2 359 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 OR56B1Q8NGI3 324 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 IGFBPL1Q8WX77 278 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 EMG1Q92979 244 aaKnown RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 RAB3CQ96E17 227 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 MRPS24Q96EL2 167 aaKnown RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 MS4A10Q96PG2 267 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 SULT4A1Q9BR01 284 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 URM1Q9BTM9 101 aaKnown RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 FAAP24Q9BTP7 215 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 SRD5A3Q9H8P0 318 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 FN3KRPQ9HA64 309 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 UBTD1Q9HAC8 227 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 SEBOXQ9HB31 216 aaPredicted RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 CHMP1AQ9HD42 196 aaPredicted RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 DYNLRB1Q9NP97 96 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 C12orf4Q9NQ89 552 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 ABCB10Q9NRK6 738 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 CBLN4Q9NTU7 201 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 OR14J1Q9UGF5 321 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 POLDIP2Q9Y2S7 368 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 MAP1AP78559 2803 aaPredicted RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 DOPEY2Q9Y3R5 2298 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DSCAMO60469 2012 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 IGHV3OR15-7A0A075B7D8 119 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 TRAV24A0A0B4J272 114 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 ISPDA4D126 451 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 MEIS3P1A6NDR6 274 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 SRRM5B3KS81 715 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 PLA2G10O15496 165 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 ORC5O43913 435 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 FCGR3BO75015 233 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 PDCD6O75340 191 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 OR7C1O76099 320 aaPredicted RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 LY6HO94772 140 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 NXPH2O95156 264 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 CYB5R3P00387 301 aaPredicted RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 VPREB1P12018 145 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 FUT3P21217 361 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 GLRA1P23415 457 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 CD80P33681 288 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 PRSS3P35030 304 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 CEBPDP49716 269 aaPredicted RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 PPOXP50336 477 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 SNRPD2P62316 118 aaKnown RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 MRPS15P82914 257 aaKnown RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 PITPNAQ00169 270 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 TLE4Q04727 773 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 BAMBIQ13145 260 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms