RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 UBE2UQ5VVX9 321 aa15.08■□□□□ 0
CKS1B-203ENST00000368439 SPARTQ8N0X7 666 aa15.08■□□□□ 0
CKS1B-203ENST00000368439 PRR18Q8N4B5 295 aa15.08■□□□□ 0
CKS1B-203ENST00000368439 OR10V1Q8NGI7 309 aa15.08■□□□□ 0
CKS1B-203ENST00000368439 PLGRKTQ9HBL7 147 aa15.08■□□□□ 0
CKS1B-203ENST00000368439 RAB9BQ9NP90 201 aa15.08■□□□□ 0
CKS1B-203ENST00000368439 ADARB2-AS1A8MUL3 147 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 CCRL2O00421 344 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 LDLRAD4O15165 306 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 SOCS1O15524 211 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 FBXO24O75426 580 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 NAPSAO96009 420 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 GAPDHP04406 335 aaKnown RBP15.07■□□□□ 0
CKS1B-203ENST00000368439 CSF1P09603 554 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 BLVRBP30043 206 aaPredicted RBP15.07■□□□□ 0
CKS1B-203ENST00000368439 REG1BP48304 166 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 CLDN12P56749 244 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 HMGN3Q15651 99 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 RAB11BQ15907 218 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 MORN2Q502X0 79 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 ZNF880Q6PDB4 577 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 OR51D1Q8NGF3 324 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 RTN4IP1Q8WWV3 396 aaPredicted RBP15.07■□□□□ 0
CKS1B-203ENST00000368439 MOB4Q9Y3A3 225 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 V9GY05 133 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 NOTCH1P46531 2555 aa15.07■□□□□ 0
CKS1B-203ENST00000368439 TRAV1-2A0A0B4J238 106 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 TRDV1A0A1B0GX56 115 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 M0QZK8 103 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 IGKV1D-33P01593 117 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 IGKV1-33P01594 117 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 LPLP06858 475 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 TMEM50BP56557 158 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 HTD2P86397 168 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 GNMTQ14749 295 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 IZUMO1Q8IYV9 350 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 OR52L2PQ8NGH6 319 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 FAM110DQ8TAY7 271 aaPredicted RBP15.06■□□□□ 0
CKS1B-203ENST00000368439 YTHDF1Q9BYJ9 559 aaKnown RBP15.06■□□□□ 0
CKS1B-203ENST00000368439 Q9H521 79 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 OR2S2Q9NQN1 319 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 KCNIP1Q9NZI2 227 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 GNG12Q9UBI6 72 aa15.06■□□□□ 0
CKS1B-203ENST00000368439 TMEM11P17152 192 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 PLA2G7Q13093 441 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 C2orf76Q3KRA6 126 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 ARSJQ5FYB0 599 aaPredicted RBP15.05■□□□□ -0
CKS1B-203ENST00000368439 STEAP3Q658P3 488 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 MOB3BQ86TA1 216 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 LYG1Q8N1E2 194 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 SVOPQ8N4V2 548 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 Q8N6K4 173 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 C5orf56Q8N8D9 126 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 FAM3DQ96BQ1 224 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 CITED2Q99967 270 aaPredicted RBP15.05■□□□□ -0
CKS1B-203ENST00000368439 URM1Q9BTM9 101 aaKnown RBP15.05■□□□□ -0
CKS1B-203ENST00000368439 PLEKHJ1Q9NW61 149 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 JPT1Q9UK76 154 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 HSF4Q9ULV5 492 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 LRRC42Q9Y546 428 aa15.05■□□□□ -0
CKS1B-203ENST00000368439 TRBV6-6A0A0A6YYG2 114 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 IGHV3-72A0A0B4J1Y9 119 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 FGF16O43320 207 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 GALP22466 123 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 IL3RAP26951 378 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 PSMD7P51665 324 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 OR10A3P58181 314 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 HES1Q14469 280 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 HNF4GQ14541 408 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 TCTEX1D4Q5JR98 221 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 LY6G6FQ5SQ64 297 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 HES5Q5TA89 166 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 ODF3L1Q8IXM7 274 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 EAF1Q96JC9 268 aaPredicted RBP15.04■□□□□ -0
CKS1B-203ENST00000368439 STEAP1Q9UHE8 339 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 AK3Q9UIJ7 227 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 PLXNB1O43157 2135 aa15.04■□□□□ -0
CKS1B-203ENST00000368439 TMEM272A0A1B0GTI8 110 aa15.03■□□□□ -0
CKS1B-203ENST00000368439 ZNF736B4DX44 427 aaPredicted RBP15.03■□□□□ -0
CKS1B-203ENST00000368439 YPEL1O60688 119 aa15.03■□□□□ -0
CKS1B-203ENST00000368439 PEX14O75381 377 aa15.03■□□□□ -0
CKS1B-203ENST00000368439 CD1BP29016 333 aa15.03■□□□□ -0
CKS1B-203ENST00000368439 PPP1CCP36873 323 aaKnown RBP15.03■□□□□ -0
CKS1B-203ENST00000368439 CD83Q01151 205 aa15.03■□□□□ -0
CKS1B-203ENST00000368439 NR2C2APQ86WQ0 139 aa15.03■□□□□ -0
CKS1B-203ENST00000368439 OR5AU1Q8NGC0 362 aa15.03■□□□□ -0
CKS1B-203ENST00000368439 RBMXL1Q96E39 390 aaKnown RBP15.03■□□□□ -0
CKS1B-203ENST00000368439 YPEL2Q96QA6 119 aa15.03■□□□□ -0
CKS1B-203ENST00000368439 HDHD3Q9BSH5 251 aaPredicted RBP15.03■□□□□ -0
CKS1B-203ENST00000368439 PDCD5O14737 125 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 KCNAB3O43448 404 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 WIPF1O43516 503 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 VEGFCP49767 419 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 PLAC9Q5JTB6 97 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 C22orf42Q6IC83 251 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 C10orf99Q6UWK7 81 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 NDUFA11Q86Y39 141 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 GALMQ96C23 342 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 ARHGAP5-AS1Q96IT6 56 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 ABHD14AQ9BUJ0 271 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms