RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ZNF318Q5VUA4 2279 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 C9orf170A2RU37 121 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 PSG9Q00887 426 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 MESTQ5EB52 335 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 LINC00271P0C7V0 271 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 CXCL2P19875 107 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 HABP2Q14520 560 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZDHHC23Q8IYP9 409 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 OR10D4PQ8NGN7 298 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 TM2D1Q9BX74 207 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 DTX4Q9Y2E6 619 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZFPL1O95159 310 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 IL18BPO95998 194 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ANXA2RQ3ZCQ2 193 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 FAM231DQ6ZW35 169 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 SMRP1Q8NCR6 262 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 KIR2DL4Q99706 377 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1W2PRF3 423 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1W2PRM7 423 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 TBX6O95947 436 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 C1QAP02745 245 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 RPS18P62269 152 aaKnown RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 SLC22A6Q4U2R8 563 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 OR11G2Q8NGC1 345 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 C11orf40Q8WZ69 217 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 A8MWP6 167 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 OOSP1A8MZH6 123 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 C17orf105B2RV13 164 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 APCSP02743 223 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF511Q8NB15 262 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 NPFFR1Q9GZQ6 430 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 LOC107986453A0A1B0GWG9 222 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 UNQ9370/PRO34162Q6UXP9 181 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 MAMSTRQ6ZN01 415 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZCCHC10Q8TBK6 192 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 TIMD4Q96H15 378 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 LMAN2Q12907 356 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 LDLRAD1Q5T700 205 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF596Q8TC21 504 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 MS4A5Q9H3V2 200 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1B0GW54 56 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 OR11H12B2RN74 326 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 CACNG7P62955 275 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 OR11H1Q8NG94 326 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 OR11H2Q8NH07 326 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1B0GX78 115 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 SSSCA1O60232 199 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 SSTR5P35346 364 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 CDKN3Q16667 212 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 Q71RC1 249 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 MOB3BQ86TA1 216 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM251Q8N6I4 163 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF414Q96IQ9 312 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 DNAJC30Q96LL9 226 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 CYSLTR1Q9Y271 337 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 CLDN14O95500 239 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 CDC34P49427 236 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 C1orf220Q5T0J3 134 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM207Q6UWW9 146 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 VSIG2Q96IQ7 327 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 PRSS21Q9Y6M0 314 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 HMGN4O00479 90 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 NKX2-2O95096 273 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 NCR2O95944 276 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 GLIPR1L1Q6UWM5 242 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ANKRD33Q7Z3H0 272 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 C1orf162Q8NEQ5 155 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 MRPS18CQ9Y3D5 142 aaKnown RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 H3BRM9 83 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF480Q8WV37 535 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 TSACCQ96A04 125 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 GLIPR2Q9H4G4 154 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 SPHK2Q9NRA0 654 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 GRIFINA4D1Z8 144 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 CCL1P22362 96 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 FOXK1P85037 733 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 MMP25Q9NPA2 562 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 CACNA1AO00555 2505 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 DNAJC4Q9NNZ3 241 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 HPRT1P00492 218 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF136P52737 540 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 MC5RP33032 325 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF816Q0VGE8 651 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 FCRLAQ7L513 359 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 C15orf53Q8NAA6 179 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 SCGB3A1Q96QR1 104 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 TRBV7-9A0A0J9YWB2 115 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 Q6ZS52 159 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 LHFPL4Q7Z7J7 247 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 YRDCQ86U90 279 aaKnown RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 FAM89BQ8N5H3 189 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 HELTA6NFD8 242 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 BLVRBP30043 206 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-207ENST00000367255 WDFY1Q8IWB7 410 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 PRDM14Q9GZV8 571 aa3.28□□□□□ -1.88
SYNE1-207ENST00000367255 SHPRHQ149N8 1683 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 CRYBA4P53673 196 aa3.28□□□□□ -1.89
SYNE1-207ENST00000367255 LY6DQ14210 128 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms