RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 SLC22A18ASQ8N1D0 253 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 R3HDM4Q96D70 268 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 TECRQ9NZ01 308 aaKnown RBP7.86□□□□□ -1.15
SYNE1-205ENST00000367251 IGKV3D-15A0A087WSY6 115 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 DEDDO75618 318 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 IGKV3-15P01624 115 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 FCGR3AP08637 254 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 FABP4P15090 132 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 TMEM50BP56557 158 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 SERF2P84101 59 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 MGAT2Q10469 447 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 PDCD1Q15116 288 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 RFLNBQ8N5W9 214 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 GMPPAQ96IJ6 420 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-205ENST00000367251 VAMP8Q9BV40 100 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 SCN10AQ9Y5Y9 1956 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 CDRT15L2A8MXV6 281 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 OR8I2Q8N0Y5 310 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 P2RX4Q99571 388 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 TMEM204Q9BSN7 226 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 LPAR5Q9H1C0 372 aa7.86□□□□□ -1.15
SYNE1-205ENST00000367251 C7orf77A4D0Y5 90 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 BMPR1BO00238 502 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 NMBP08949 121 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 H1FOOQ8IZA3 346 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-205ENST00000367251 OR10D4PQ8NGN7 298 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 DTD1Q8TEA8 209 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 PRNDQ9UKY0 176 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 KCNAB3O43448 404 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 IGHV3-13P01766 116 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 IGHV3-7P01780 117 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 ASCL5Q7RTU5 278 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 AQP10Q96PS8 301 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 YAE1D1Q9NRH1 226 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 KCNE5Q9UJ90 142 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 PATJQ8NI35 1801 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 H0Y980 276 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 ORM2P19652 201 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 CEACAM21Q3KPI0 293 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 LAMTOR1Q6IAA8 161 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 OR2T10Q8NGZ9 312 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 TXNDC17Q9BRA2 123 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 PIMREGQ9BSJ6 248 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 RNF122Q9H9V4 155 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 CCL28Q9NRJ3 127 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 PRSS50Q9UI38 385 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 TRIP12Q14669 1992 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-205ENST00000367251 CTXND1A0A1B0GTU2 59 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 C4orf51C9J302 202 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 SLC25A17O43808 307 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 HSBP1O75506 76 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 NEURL1O76050 574 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 OR2A4O95047 310 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 FGF5P12034 268 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 HTN3P15516 51 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 TMEM183BQ1AE95 376 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 NOL4LQ96MY1 436 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-205ENST00000367251 OR2A7Q96R45 310 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 WFDC6Q9BQY6 131 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 FAM206AQ9NX38 181 aa7.85□□□□□ -1.15
SYNE1-205ENST00000367251 TMEM229AB2RXF0 380 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 SP1P08047 785 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 IFITM2Q01629 132 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 ZNF418Q8TF45 676 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-205ENST00000367251 ABHD14AQ9BUJ0 271 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 DOK5Q9P104 306 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 KCNK7Q9Y2U2 307 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 LIPGQ9Y5X9 500 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 IGHV1-45A0A0A0MS14 117 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 NKX2-6A6NCS4 301 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 PHOX2AO14813 284 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 COX5BP10606 129 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 DLX1P56177 255 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 FGF12P61328 243 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 LINC01590Q5TEZ4 76 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 FBXW9Q5XUX1 488 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 ZNF660Q6AZW8 331 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-205ENST00000367251 CENPVQ7Z7K6 275 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-205ENST00000367251 TMEM116Q8NCL8 245 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 MRGPRDQ8TDS7 321 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 NPAS1Q99742 590 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 FSCN3Q9NQT6 498 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 ZMIZ1Q9ULJ6 1067 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 COLQQ9Y215 455 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-205ENST00000367251 INSIG2Q9Y5U4 225 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 ZNF638Q14966 1978 aaKnown RBP7.84□□□□□ -1.15
SYNE1-205ENST00000367251 IGKV3D-11A0A0A0MRZ8 115 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 PIN1P1O15428 100 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 ZNF205O95201 554 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 IGKV3-11P04433 115 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 ZXDAP98168 799 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 RELBQ01201 579 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 LYZL2Q7Z4W2 148 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 PACRGQ96M98 296 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-205ENST00000367251 IGKV1D-42A0A075B6H8 117 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 LOC390937A0A1W2PQ73 354 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 PTBP3O95758 552 aaKnown RBP7.84□□□□□ -1.15
SYNE1-205ENST00000367251 HOXB1P14653 301 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-205ENST00000367251 DLK1P80370 383 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 CCDC144NLQ6NUI1 221 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms