RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 C3orf85A0A1B0GTC6 90 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 SH2D1BO14796 132 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 COX7A2P2O60397 106 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 DYNLT3P51808 116 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 AP5S1Q9NUS5 200 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 NACAE9PAV3 2078 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 TANC1Q9C0D5 1861 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 HS3ST1O14792 307 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 G6PCP35575 357 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 HFEQ30201 348 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 C10orf128Q5T292 105 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF775Q96BV0 537 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZFP30Q9Y2G7 519 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 H3BP45 60 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 HIST1H1EP10412 219 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 CTAG1AP78358 180 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 TNFRSF9Q07011 255 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 CISD2Q8N5K1 135 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 NDFIP1Q9BT67 221 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 COL4A6Q14031 1691 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 SNURFLB1AK76 121 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 MDKP21741 143 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 UCP3P55916 312 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC25A26Q70HW3 274 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 GPR27Q9NS67 375 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 CFDP00746 253 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 OPRM1P35372 400 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM255AQ5JRV8 349 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 NIT1Q86X76 327 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 SFTPA2Q8IWL1 248 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 ADAD2Q8NCV1 583 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR10G4Q8NGN3 311 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR10G9Q8NGN4 311 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR10G7Q8NGN6 311 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 RAB40CQ96S21 281 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 GDF15Q99988 308 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 KCNK15Q9H427 330 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 BARX1Q9HBU1 254 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 KCNK7Q9Y2U2 307 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 STARD10Q9Y365 291 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 LOXL2Q9Y4K0 774 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 TIMM9Q9Y5J7 89 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF732B4DXR9 585 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 SPINT2O43291 252 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 ADAM20O43506 726 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 BRS3P32247 399 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 IER3P46695 156 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 H2BFSP57053 126 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC38A11Q08AI6 406 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM136Q6ZRR5 245 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 LURAP1LQ8IV03 231 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM216AQ8WUB2 273 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 GNRHR2Q96P88 292 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 TM2D1Q9BX74 207 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 PEF1Q9UBV8 284 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 SOX21Q9Y651 276 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 BRWD1Q9NSI6 2320 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 IGLV3-32A0A0A0MS00 114 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR4C46A6NHA9 309 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 NXPH2O95156 264 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 PGA5P0DJD9 388 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 IL11P20809 199 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 F2RP25116 425 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 TSPAN7P41732 249 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 IGFBP7Q16270 282 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 DNLZQ5SXM8 178 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 NUFIP2Q7Z417 695 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR2C3Q8N628 320 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 COL25A1Q9BXS0 654 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM117AQ9C073 453 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC25A22Q9H936 323 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 ANKRD10Q9NXR5 420 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 G3V3Y1 287 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 BMI1P35226 326 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 RIPPLY2Q5TAB7 128 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF430Q9H8G1 570 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 CLDN16Q9Y5I7 305 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 PLXNA2O75051 1894 aa4.68□□□□□ -1.66
CDC42BPA-204ENST00000366767 IGHV1-45A0A0A0MS14 117 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 C5orf49A4QMS7 147 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 CTSBP07858 339 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SCGB1A1P11684 91 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 PMELP40967 661 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 CAMPP49913 170 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 IL24Q13007 206 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 C16orf47Q6ZP98 133 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR10D3Q8NH80 312 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 RAB37Q96AX2 223 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 CLDN23Q96B33 292 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SEMA5BQ9P283 1151 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 TINAGQ9UJW2 476 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 RIPPLY3P57055 190 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 TRAT1Q6PIZ9 186 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF441Q8N8Z8 693 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC25A28Q96A46 364 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR2J1Q9GZK6 312 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 RPL36A-HNRNPH2H7BZ11 118 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SPRY1O43609 319 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 STAG3L3P0CL85 134 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 COX5BP10606 129 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms