RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 EBNA1BP2Q99848 306 aaKnown RBP0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 C11orf49Q9H6J7 331 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 PSMD13Q9UNM6 376 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 INTS1Q8N201 2190 aaKnown RBP0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 IGHV3-73A0A0B4J1V6 119 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 DHRS12A0PJE2 317 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 C11orf86A6NJI1 115 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 hCG_2039718K7EN88 272 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 SHOX2O60902 331 aaPredicted RBP0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 PPP1CCP36873 323 aaKnown RBP0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 GABARAPL2P60520 117 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 TRAM1Q15629 374 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 TRIP13Q15645 432 aaPredicted RBP0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 HSP90AA4PQ58FG1 418 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 NAA40Q86UY6 237 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 SYS1Q8N2H4 156 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 ZNF283Q8N7M2 679 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 MGLLQ99685 303 aa0.8□□□□□ -2.28
RNU4-28P-201ENST00000364739 CDK14O94921 469 aa0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 SNAI1O95863 264 aaPredicted RBP0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 STAG3L2P0CL84 134 aa0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 PRB4P10163 310 aaPredicted RBP0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 SLC25A16P16260 332 aa0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 G6PCP35575 357 aa0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 RPL14P50914 215 aaKnown RBP0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 RASL11AQ6T310 242 aa0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 GLT6D1Q7Z4J2 308 aa0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 OR5D18Q8NGL1 313 aa0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 FGF13Q92913 245 aa0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 ZNF471Q9BX82 626 aaPredicted RBP0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 TMBIM4Q9HC24 238 aa0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 RMND1Q9NWS8 449 aa0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 MRPS16Q9Y3D3 137 aaKnown RBP0.79□□□□□ -2.28
RNU4-28P-201ENST00000364739 WDR90Q96KV7 1748 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 PSMD11O00231 422 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 EPPINO95925 133 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 IGHV3-30-3P0DP02 117 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 RAP1GDS1P52306 607 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 AKR1C2P52895 323 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 FAM162BQ5T6X4 162 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 Q6ZT83 130 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 ASCC1Q8N9N2 400 aaKnown RBP0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 OR11L1Q8NGX0 322 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 GALMQ96C23 342 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 C1QTNF6Q9BXI9 259 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 SCML1Q9UN30 329 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 BAZ2BQ9UIF8 2168 aaKnown RBP0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 TNIKQ9UKE5 1360 aa0.78□□□□□ -2.28
RNU4-28P-201ENST00000364739 IGHV3-15A0A0B4J1V0 119 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 UBDO15205 165 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 VAPBO95292 243 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 CRYGCP07315 174 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 ZNF705DP0CH99 300 aaPredicted RBP0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 ZNF705BP0CI00 300 aaPredicted RBP0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 ESDP10768 282 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 CTSEP14091 401 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 SLC35A2P78381 396 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 PDK2Q15119 407 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 FAM201AQ5SY85 155 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 Q6ZTI0 123 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 YIPF7Q8N8F6 280 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 ZNF321PQ8N8H1 164 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 OR5P2Q8WZ92 322 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 TBX5Q99593 518 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 FAAP24Q9BTP7 215 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 IFT46Q9NQC8 304 aa0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 CHD2O14647 1828 aaKnown RBP0.77□□□□□ -2.29
RNU4-28P-201ENST00000364739 DIDO1Q9BTC0 2240 aaKnown RBP0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 MGAT4DA6NG13 374 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 BOLA2-SMG1P6H3BVE0 249 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 CDIPTO14735 213 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 POLR3GO15318 223 aaPredicted RBP0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 GNRH2O43555 120 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 BGNP21810 368 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 DNASE1L1P49184 302 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 MAPK14Q16539 360 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 CAVIN4Q5BKX8 364 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 LRRC28Q86X40 367 aaPredicted RBP0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 ZBTB8OSQ8IWT0 167 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 OR13C9Q8NGT0 318 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 LGALS14Q8TCE9 139 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 C11orf1Q9H5F2 150 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 XKR8Q9H6D3 395 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 ANGPT4Q9Y264 503 aa0.76□□□□□ -2.29
RNU4-28P-201ENST00000364739 ZNF469Q96JG9 3925 aaPredicted RBP0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 MDFIC2A0A1B0GVS7 189 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 RFPL4AA6NLU0 287 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 RFPL4AL1F8VTS6 287 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 H3BPC8 53 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 TPM2P07951 284 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 FBP1P09467 338 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 RPA3P35244 121 aaPredicted RBP0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 SULT1A2P50226 295 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 AQP5P55064 265 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 SLC38A11Q08AI6 406 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 OR51E2Q9H255 320 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 CLEC2DQ9UHP7 191 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 HEATR5BQ9P2D3 2071 aa0.75□□□□□ -2.29
RNU4-28P-201ENST00000364739 UBFD1O14562 309 aaKnown RBP0.74□□□□□ -2.29
RNU4-28P-201ENST00000364739 ZMPSTE24O75844 475 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms