RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 FAM157CP0CG43 387 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 CSRP2Q16527 193 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 IGHV3-49A0A0A0MS15 119 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 GAPDHP04406 335 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 CLPPQ16740 277 aaPredicted RBP17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 PARD6AQ9NPB6 346 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 CA10Q9NS85 328 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 SSBP1Q04837 148 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 TMEM241Q24JQ0 296 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 RAB29O14966 203 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 ICMTO60725 284 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 THY1P04216 161 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 EMP1P54849 157 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 ASXL3Q9C0F0 2248 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 S100A8P05109 93 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 OR1L8Q8NGR8 309 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 GSX2Q9BZM3 304 aa17.59■□□□□ 0.41
CDC42BPB-201ENST00000361246 P01737 135 aa17.58■□□□□ 0.41
CDC42BPB-201ENST00000361246 VKORC1L1Q8N0U8 176 aa17.58■□□□□ 0.41
CDC42BPB-201ENST00000361246 ZFC3H1O60293 1989 aaKnown RBP17.58■□□□□ 0.41
CDC42BPB-201ENST00000361246 SYNGR2O43760 224 aa17.58■□□□□ 0.41
CDC42BPB-201ENST00000361246 CDKN1AP38936 164 aa17.58■□□□□ 0.41
CDC42BPB-201ENST00000361246 OR2T8A6NH00 312 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 OR2H2O95918 312 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 HTN3P15516 51 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 FADS6Q8N9I5 356 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 TECRQ9NZ01 308 aaKnown RBP17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 SS18L1O75177 396 aaPredicted RBP17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 EFNB2P52799 333 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 FOXB2Q5VYV0 432 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 MRPL54Q6P161 138 aaKnown RBP17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 MRPL24Q96A35 216 aaKnown RBP17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 RPL36A-HNRNPH2H7BZ11 118 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 ZNF207O43670 478 aaKnown RBP17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 HIGD1AQ9Y241 93 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 C1QAP02745 245 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 NEU3Q9UQ49 428 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 RP1P56715 2156 aa17.58■□□□□ 0.4
CDC42BPB-201ENST00000361246 CLEC18BQ6UXF7 455 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 ZNF426Q9BUY5 554 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 IGHV1-69-2A0A0G2JMI3 117 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 PNKDQ8N490 385 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 FAM210BQ96KR6 192 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 SELENOKQ9Y6D0 94 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 H3BTX0 84 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 CTF1Q16619 201 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 OR2D3Q8NGH3 330 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 ZNF519Q8TB69 540 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 TNS1Q9HBL0 1735 aaKnown RBP17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 HIST1H1EP10412 219 aaKnown RBP17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 PGLYRP3Q96LB9 341 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 OR2W1Q9Y3N9 320 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 DHRS7CA6NNS2 312 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 TMEM33P57088 247 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 SLC26A10Q8NG04 563 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 ANGPTL6Q8NI99 470 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 PRNDQ9UKY0 176 aa17.57■□□□□ 0.4
CDC42BPB-201ENST00000361246 SHISA5Q8N114 240 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 RGP1Q92546 391 aaPredicted RBP17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 AKIRIN1Q9H9L7 192 aaPredicted RBP17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 hCG_38984A0A1B0GV85 526 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 SLC6A1P30531 599 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 KIF13BQ9NQT8 1826 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 MFNGO00587 321 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 SCTP09683 121 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 FAM201AQ5SY85 155 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 LSMEM1Q8N8F7 131 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 OR8A1Q8NGG7 326 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 LPAR5Q9H1C0 372 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 WSB1Q9Y6I7 421 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 SRSF10O75494 262 aaKnown RBP17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 LDLRAD3Q86YD5 345 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 TMEM50BP56557 158 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 PEAR1Q5VY43 1037 aaPredicted RBP17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 OR4A5Q8NH83 315 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 ANGPTL4Q9BY76 406 aa17.56■□□□□ 0.4
CDC42BPB-201ENST00000361246 MPC2O95563 127 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 SPCS3P61009 180 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 SNRNP40Q96DI7 357 aaKnown RBP17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 SLC17A5Q9NRA2 495 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 RCC2Q9P258 522 aaKnown RBP17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 C11orf94C9JXX5 98 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 LRRC75AQ8NAA5 344 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 OR4C12Q96R67 309 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 ABHD1Q96SE0 405 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 SLC25A17O43808 307 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 EIF3GO75821 320 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 FCGR2BP31994 310 aaPredicted RBP17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 OR10J6PQ8NGY7 276 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 CFHR5Q9BXR6 569 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 TEX50A0A1B0GTY4 177 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 TMEM262E9PQX1 116 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 AREGP15514 252 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 TOMM20LQ6UXN7 152 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 TMEM18Q96B42 140 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 OR1L6Q8NGR2 347 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 WNT2BQ93097 391 aa17.55■□□□□ 0.4
CDC42BPB-201ENST00000361246 A0A1B0GU03 582 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 M0R2Z0 102 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 RFPL3SP0C7P2 107 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms