RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 HDHD3Q9BSH5 251 aaPredicted RBP11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 MRPL37Q9BZE1 423 aaKnown RBP11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 SMIM3Q9BZL3 60 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 LPAR3Q9UBY5 353 aa11.77□□□□□ -0.53
CSNK1E-201ENST00000359867 A0A087X0M5 115 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 TRBV6-7A0A0A0MS04 114 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 A0A1B0GX30 115 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 OR5H1A6NKK0 313 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 A6NLC8 198 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 AP4M1O00189 453 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 GRNP28799 593 aaKnown RBP11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 UCP2P55851 309 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 OR2B8PP59922 312 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 IL24Q13007 206 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 ISOC2Q96AB3 205 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 OR51B6Q9H340 312 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 RIMS4Q9H426 269 aaPredicted RBP11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 NECAP2Q9NVZ3 263 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 MTCH1Q9NZJ7 389 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 ZNF581Q9P0T4 197 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 IGKV1D-8A0A087WSZ0 117 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 hCG_1809904A0A1W2PP81 198 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 A0A1W2PR64 198 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 A0A1W2PRV1 198 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 C9JQL5 133 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 MBP02144 154 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 SFTA3P0C7M3 94 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 SEC11CQ9BY50 192 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 DECR2Q9NUI1 292 aa11.76□□□□□ -0.53
CSNK1E-201ENST00000359867 OR7C1O76099 320 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 CD80P33681 288 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 CYCSP99999 105 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 GAMTQ14353 236 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 DAZAP2Q15038 168 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 SRSF7Q16629 238 aaKnown RBP eCLIP11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 PRR18Q8N4B5 295 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 FAM169BQ8N8A8 192 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 RTL8AQ9BWD3 113 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 OR2J1Q9GZK6 312 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 GFOD1Q9NXC2 390 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 IQCF6A8MYZ5 107 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 LILRA1O75019 489 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 SNRPCP09234 159 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 CA6P23280 308 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 NAAAQ02083 359 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 SPATA46Q5T0L3 261 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 DHRS11Q6UWP2 260 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 C1orf174Q8IYL3 243 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 C15orf54Q8N8G6 183 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 SLC5A7Q9GZV3 580 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 OR51I2Q9H344 312 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 ZNF442Q9H7R0 627 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 ZNF286AQ9HBT8 521 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 PLA2G2EQ9NZK7 142 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 RCC2Q9P258 522 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 DNAJB11Q9UBS4 358 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 AMDHD2Q9Y303 409 aa11.75□□□□□ -0.53
CSNK1E-201ENST00000359867 C16orf97H3BN30 126 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 ASCL1P50553 236 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 OR1J1Q8NGS3 322 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 SLC25A40Q8TBP6 338 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 TAF9BQ9HBM6 251 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 RAB18Q9NP72 206 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 SMCO4Q9NRQ5 59 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 ELOVL5Q9NYP7 299 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 USP9XQ93008 2570 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 CADP27708 2225 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 RNASEK-C17orf49H0YIS7 233 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 J3QT63 122 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 ZNF205O95201 554 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 IGLV1-44P01699 117 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 OR5H8P0DN80 308 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 IL13RA2Q14627 380 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 USF2Q15853 346 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 Q6ZS49 121 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 ZNF2Q9BSG1 426 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 SPACA1Q9HBV2 294 aa11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 C14orf166Q9Y224 244 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-201ENST00000359867 SYNGR1O43759 233 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 SCGB1D2O95969 90 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 NUTF2P61970 127 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 OR8G1Q15617 311 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 TIMM23BQ5SRD1 257 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 IL34Q6ZMJ4 242 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 POC1AQ8NBT0 407 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 C2orf50Q96LR7 162 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 LRP5LA4QPB2 252 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 MARCH11A6NNE9 402 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 HIST1H1BP16401 226 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 BRICD5Q6PL45 260 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 ITLN2Q8WWU7 325 aaPredicted RBP11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 AKR1E2Q96JD6 320 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 A0A1W2PPH5 198 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 CTSDP07339 412 aaPredicted RBP11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 OR8U9P0C7N5 309 aa11.73□□□□□ -0.53
CSNK1E-201ENST00000359867 GNG10P50151 68 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms