RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PAFAH1B2P68402 229 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 FAM53AQ6NSI3 398 aaPredicted RBP14□□□□□ -0.17
COL18A1-203ENST00000359759 OVCH2Q7RTZ1 564 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 ZNF441Q8N8Z8 693 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 PXMP4Q9Y6I8 212 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 IGHV3-72A0A0B4J1Y9 119 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 C9orf172C9J069 976 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 COL9A1P20849 921 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 HMGA2P52926 109 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 CYB5R2Q6BCY4 276 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 PRDM14Q9GZV8 571 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 KLK15Q9H2R5 256 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 COX6CP09669 75 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 PGLYRP3Q96LB9 341 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 GPA33Q99795 319 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 TTC3P53804 2025 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 LDLRAD4O15165 306 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 OR2A4O95047 310 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 C16orf92Q96LL3 132 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 OR2A7Q96R45 310 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 TCFL5Q9UL49 500 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.99□□□□□ -0.17
COL18A1-203ENST00000359759 ZNF98A6NK75 572 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 DCAF12L2Q5VW00 463 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 HILPDAQ9Y5L2 63 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 IBA57Q5T440 356 aaKnown RBP13.99□□□□□ -0.17
COL18A1-203ENST00000359759 OR1L8Q8NGR8 309 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 C7orf71A4D174 169 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 LRRC75BQ2VPJ9 315 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 TMEM211Q6ICI0 200 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 ITGBL1O95965 494 aaPredicted RBP13.99□□□□□ -0.17
COL18A1-203ENST00000359759 NUBP1P53384 320 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 TMEM92Q6UXU6 159 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 ATG4DQ86TL0 474 aaPredicted RBP13.99□□□□□ -0.17
COL18A1-203ENST00000359759 IL19Q9UHD0 177 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 DDX60LQ5H9U9 1706 aaKnown RBP13.99□□□□□ -0.17
COL18A1-203ENST00000359759 ECM29Q5VYK3 1845 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 VSIG8P0DPA2 414 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 MRGPRX3Q96LB0 322 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 MRPS18BQ9Y676 258 aaKnown RBP13.99□□□□□ -0.17
COL18A1-203ENST00000359759 SSTR5P35346 364 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 HMGCLL1Q8TB92 370 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 ABHD14BQ96IU4 210 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 TNFSF18Q9UNG2 199 aa13.99□□□□□ -0.17
COL18A1-203ENST00000359759 GLULP15104 373 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 MRPL18Q9H0U6 180 aaKnown RBP13.98□□□□□ -0.17
COL18A1-203ENST00000359759 LMX1BO60663 402 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 CYB5R3P00387 301 aaPredicted RBP13.98□□□□□ -0.17
COL18A1-203ENST00000359759 RAC3P60763 192 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 RRN3P1Q2M238 152 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 VN1R4Q7Z5H5 301 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 DPH3Q96FX2 82 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 RARRES2Q99969 163 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 SLC25A10Q9UBX3 287 aaPredicted RBP13.98□□□□□ -0.17
COL18A1-203ENST00000359759 BCL2P10415 239 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 LGALS3P17931 250 aaKnown RBP13.98□□□□□ -0.17
COL18A1-203ENST00000359759 ZNF79Q15937 498 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 GPR35Q9HC97 309 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 GLRX2Q9NS18 164 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 SOX21Q9Y651 276 aaPredicted RBP13.98□□□□□ -0.17
COL18A1-203ENST00000359759 LAMB1P07942 1786 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 CDK5RAP2Q96SN8 1893 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 CLDN14O95500 239 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 ASCL5Q7RTU5 278 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 C1RLQ9NZP8 487 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 TAF1P21675 1872 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 TRA2AQ13595 282 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL18A1-203ENST00000359759 KCNMB1Q16558 191 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 OR1P1Q8NH06 330 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 LSM10Q969L4 123 aaKnown RBP13.98□□□□□ -0.17
COL18A1-203ENST00000359759 RASL10BQ96S79 203 aa13.98□□□□□ -0.17
COL18A1-203ENST00000359759 CEACAM18A8MTB9 384 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 HBZP02008 142 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 PRSS2P07478 247 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 OIT3Q8WWZ8 545 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 KLHDC2Q9Y2U9 406 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 HYPMO75409 117 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 VSIG10L2P0DP72 767 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 GZMHP20718 246 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 PSG6Q00889 435 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 HCP5Q6MZN7 132 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 NUDT16L1Q9BRJ7 211 aaKnown RBP13.97□□□□□ -0.17
COL18A1-203ENST00000359759 PQLC2Q6ZP29 291 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 TMEM136Q6ZRR5 245 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 ZAR1Q86SH2 424 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 ZPLD1Q8TCW7 415 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 GPBAR1Q8TDU6 330 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 OR2V2Q96R30 315 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 IGLV3-16A0A075B6K0 115 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 C2orf83Q53S99 150 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 OR10J6PQ8NGY7 276 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 PARLQ9H300 379 aa13.97□□□□□ -0.17
COL18A1-203ENST00000359759 IGHV4-34P06331 123 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 TM4SF20Q53R12 229 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 RFLNBQ8N5W9 214 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 LHX9Q9NQ69 397 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 TSPAN2O60636 221 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 SEC11BP0C7V7 166 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 CCL3P10147 92 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms