RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 GNB2P62879 340 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 SNAI3Q3KNW1 292 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 SLC23A3Q6PIS1 610 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 C11orf42Q8N5U0 333 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 MARVELD3Q96A59 401 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 ADTRPQ96IZ2 230 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 ABHD14AQ9BUJ0 271 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 TMEM222Q9H0R3 208 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 PITX3O75364 302 aa11.9□□□□□ -0.51
VCP-201ENST00000358901 CD74P04233 296 aa11.9□□□□□ -0.51
VCP-201ENST00000358901 MMP9P14780 707 aa11.9□□□□□ -0.51
VCP-201ENST00000358901 COX7A1P24310 79 aa11.9□□□□□ -0.51
VCP-201ENST00000358901 RPS11P62280 158 aaKnown RBP eCLIP11.9□□□□□ -0.51
VCP-201ENST00000358901 NSUN5P2Q63ZY6 315 aa11.9□□□□□ -0.51
VCP-201ENST00000358901 ZNF665Q9H7R5 613 aa11.9□□□□□ -0.51
VCP-201ENST00000358901 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
VCP-201ENST00000358901 NPIPB9F8W1W9 429 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 ADAM11O75078 769 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 RECKO95980 971 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 BCL2P10415 239 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 FGF12P61328 243 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 H1FOOQ8IZA3 346 aaPredicted RBP11.89□□□□□ -0.51
VCP-201ENST00000358901 SRCAPQ6ZRS2 3230 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 A0A1W2PN81 502 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 TRIP6Q15654 476 aaKnown RBP11.89□□□□□ -0.51
VCP-201ENST00000358901 RPEL1Q2QD12 228 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 CEACAM21Q3KPI0 293 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 ZNF383Q8NA42 475 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 ANAPC16Q96DE5 110 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 ANGPTL4Q9BY76 406 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 SMDT1Q9H4I9 107 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 TMEM229AB2RXF0 380 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 FAM157CP0CG43 387 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 KLK2P20151 261 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 KIR2DS2P43631 304 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 C2orf68Q2NKX9 166 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 TMEM167BQ9NRX6 74 aa11.89□□□□□ -0.51
VCP-201ENST00000358901 TECRQ9NZ01 308 aaKnown RBP11.89□□□□□ -0.51
VCP-201ENST00000358901 AAMDCQ9H7C9 122 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 HS3ST3B1Q9Y662 390 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 TGFBR3LH3BV60 316 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 CDK2AP1O14519 115 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 PTBP3O95758 552 aaKnown RBP11.88□□□□□ -0.51
VCP-201ENST00000358901 SERF2P84101 59 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 GLRX2Q9NS18 164 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 PITPNC1Q9UKF7 332 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 C21orf140B9A014 251 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 SPCS3P61009 180 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 TGIF2LXQ8IUE1 241 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 ZBTB34Q8NCN2 500 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 POM121Q96HA1 1249 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 TUBD1Q9UJT1 453 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 LOC101059948A0A1B0GTJ6 334 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 EPOPA6NHQ4 379 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 H0YL77 283 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 NPY1RP25929 384 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 FHITP49789 147 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 MRPL54Q6P161 138 aaKnown RBP11.88□□□□□ -0.51
VCP-201ENST00000358901 TCTEX1D1Q8N7M0 179 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 SLC2A8Q9NY64 477 aa11.88□□□□□ -0.51
VCP-201ENST00000358901 TNS1Q9HBL0 1735 aaKnown RBP11.87□□□□□ -0.51
VCP-201ENST00000358901 SYNGR1O43759 233 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 EIF3GO75821 320 aaKnown RBP eCLIP11.87□□□□□ -0.516e-7■■■■■ 42.9
VCP-201ENST00000358901 FREM3P0C091 2139 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 ETFRF1Q6IPR1 90 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 OR4F17Q8NGA8 305 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 SEBOXQ9HB31 216 aaPredicted RBP11.87□□□□□ -0.51
VCP-201ENST00000358901 HTR1DP28221 377 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 RSPO4Q2I0M5 234 aaPredicted RBP11.87□□□□□ -0.51
VCP-201ENST00000358901 WDR73Q6P4I2 378 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 OR52M1Q8NGK5 317 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 TTTY12Q9BZ98 90 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 WDR61Q9GZS3 305 aaKnown RBP11.87□□□□□ -0.51
VCP-201ENST00000358901 RGPD4Q7Z3J3 1758 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 A0A1W2PPE3 182 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 TRGC2P03986 189 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 PTTG1IPP53801 180 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 HFEQ30201 348 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 DHRS11Q6UWP2 260 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 ONECUT1Q9UBC0 465 aa11.87□□□□□ -0.51
VCP-201ENST00000358901 ZNF785A8K8V0 405 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 SP1P08047 785 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 UNC119Q13432 240 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 DPPA3Q6W0C5 159 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 APCDD1LQ8NCL9 501 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 PRSS3P2Q8NHM4 247 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 SGMS2Q8NHU3 365 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 VSTM2AQ8TAG5 236 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 TMEM204Q9BSN7 226 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 PIPOXQ9P0Z9 390 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 YTHDF2Q9Y5A9 579 aaKnown RBP11.86□□□□□ -0.51
VCP-201ENST00000358901 XIRP1Q702N8 1843 aaKnown RBP11.86□□□□□ -0.51
VCP-201ENST00000358901 MSGN1A6NI15 193 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 RAMP1O60894 148 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 CD8AP01732 235 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 CCKARP32238 428 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 IZUMO4Q1ZYL8 232 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 TMEM251Q8N6I4 163 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 Q96M66 194 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 GREB1Q4ZG55 1949 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms