RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 MRGPRFQ96AM1 343 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 DDA1Q9BW61 102 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 TAAR3PQ9P1P4 343 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 A8MXE2 369 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 APOA2P02652 100 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 ATP6V0CP27449 155 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 PPP1CBP62140 327 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 MZT1Q08AG7 82 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 DEFB109BQ30KR1 87 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 TMEM230Q96A57 120 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 WFIKKN1Q96NZ8 548 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 PARP11Q9NR21 331 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 C5orf42Q9H799 3197 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 LTBP2Q14767 1821 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 B4E171 279 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 HSBP1L1C9JCN9 74 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 CDS2O95674 445 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 CYC1P08574 325 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 TSPAN7P41732 249 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 NOVA1P51513 510 aaKnown RBP10.58□□□□□ -0.72
COL20A1-201ENST00000358894 SPEM2Q0P670 501 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 CALHM1Q8IU99 346 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 OR51I2Q9H344 312 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 MPC1Q9Y5U8 109 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 BPTFQ12830 3046 aa10.58□□□□□ -0.72
COL20A1-201ENST00000358894 M0QZK8 103 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 GGCTO75223 188 aaKnown RBP10.57□□□□□ -0.72
COL20A1-201ENST00000358894 CD200P41217 278 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 ZNF718Q3SXZ3 478 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 ADAMTS17Q8TE56 1095 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 VAMP8Q9BV40 100 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 RNF126Q9BV68 326 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 CBLN4Q9NTU7 201 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 PCNX1Q96RV3 2341 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 CHRNA7P36544 502 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 GPR12P47775 334 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 OR8B8Q15620 311 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 IZUMO4Q1ZYL8 232 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 ZNF343Q6P1L6 599 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 MRGPRDQ8TDS7 321 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 BORCS7Q96B45 105 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 SARAFQ96BY9 339 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 PAM16Q9Y3D7 125 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 PCDH15Q96QU1 1955 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 RBFOX3A6NFN3 312 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 G3V3Q6 166 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 SPINK4O60575 86 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 SEC11BP0C7V7 166 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 KCNMB1Q16558 191 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 MPV17LQ2QL34 196 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 RIPPLY2Q5TAB7 128 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 MDP1Q86V88 176 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 OR5A2Q8NGI9 324 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 OR1K1Q8NGR3 316 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 OR2J1Q9GZK6 312 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 ZDHHC11Q9H8X9 412 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 AUP1Q9Y679 476 aa10.57□□□□□ -0.72
COL20A1-201ENST00000358894 PTGDSP41222 190 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 SOX8P57073 446 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 RAB24Q969Q5 203 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 OR2D2Q9H210 308 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 SH3BGRL3Q9H299 93 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 PRSS50Q9UI38 385 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 KIAA1549LQ6ZVL6 1849 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 TMEM30CPA0ZSE6 113 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 C5orf52A6NGY3 159 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 C17orf112F2Z3M2 114 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 ACTL6BO94805 426 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 PSG2P11465 335 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 UBE2G2P60604 165 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 RNF24Q9Y225 148 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 CARHSP1Q9Y2V2 147 aaKnown RBP10.56□□□□□ -0.72
COL20A1-201ENST00000358894 SPTBN1Q01082 2364 aaKnown RBP10.56□□□□□ -0.72
COL20A1-201ENST00000358894 DBX1A6NMT0 343 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 UBE2CO00762 179 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 SYNGR3O43761 229 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 KLF7O75840 302 aaPredicted RBP10.56□□□□□ -0.72
COL20A1-201ENST00000358894 SFTPCP11686 197 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 SELEP16581 610 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 TNFSF4P23510 183 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 TMEM252Q8N6L7 170 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 MOB3AQ96BX8 217 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 RAB40CQ96S21 281 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 ZDHHC8Q9ULC8 765 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 PKDREJQ9NTG1 2253 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 SHANK1Q9Y566 2161 aa10.56□□□□□ -0.72
COL20A1-201ENST00000358894 GAPDHP04406 335 aaKnown RBP10.55□□□□□ -0.72
COL20A1-201ENST00000358894 FGF12P61328 243 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 HLA-DRB3P79483 266 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 EIF3IQ13347 325 aaKnown RBP10.55□□□□□ -0.72
COL20A1-201ENST00000358894 CEACAM21Q3KPI0 293 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 OR2Z1Q8NG97 314 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 ZNF596Q8TC21 504 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 HIPK2Q9H2X6 1198 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 PITPNC1Q9UKF7 332 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 PSG11Q9UQ72 335 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 SHISA7A6NL88 538 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 H0YL77 283 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 SYNGR2O43760 224 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 HNRNPA3P51991 378 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms