RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ADIPOR1Q96A54 375 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 FUT9Q9Y231 359 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 TRDCB7Z8K6 153 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 ADIPOQQ15848 244 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 CLEC18BQ6UXF7 455 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 FMN2Q9NZ56 1722 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 IGHV3-73A0A0B4J1V6 119 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 A0A1B0GU03 582 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 KLK8O60259 260 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 SNCGO76070 127 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 CTSSP25774 331 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 KLRB1Q12918 225 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 C18orf15Q96N68 181 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 PPYP01298 95 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 P01737 135 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 SAA1P0DJI8 122 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-202ENST00000357409 DHRS2Q13268 280 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 C21orf62-AS1Q17RA5 79 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 LSM4Q9Y4Z0 139 aaKnown RBP6.35□□□□□ -1.39
VPS13A-202ENST00000357409 SRSF10O75494 262 aaKnown RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 PRB1P04280 392 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 ZNF415Q09FC8 603 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 ZNF770Q6IQ21 691 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 FAM181AQ8N9Y4 354 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 OR4C5Q8NGB2 326 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 ZNF837Q96EG3 531 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 VAMP8Q9BV40 100 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 SH2D2AQ9NP31 389 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 PAM16Q9Y3D7 125 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 F11RQ9Y624 299 aaKnown RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 SIRT4Q9Y6E7 314 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 GRIFINA4D1Z8 144 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 CCL3L1P16619 93 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 KLF9Q13886 244 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 IL13RA2Q14627 380 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 OR1N2Q8NGR9 330 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 MIEN1Q9BRT3 115 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 COL16A1Q07092 1604 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 TMEM219Q86XT9 240 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 CIB3Q96Q77 187 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 IGHV3-64A0A075B6Q5 118 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 C1QL1O75973 258 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 ZNF56Q15929 161 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 AANATQ16613 207 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 MEIG1Q5JSS6 88 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 ATG4DQ86TL0 474 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 TMEM129A0AVI4 362 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 MAP1LC3B2A6NCE7 125 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 SYNGR2O43760 224 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 TRGV3P03979 118 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 RPL35AP18077 110 aaKnown RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 MAP1LC3BQ9GZQ8 125 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 RAB33BQ9H082 229 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 IL20Q9NYY1 176 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 DHRS7CA6NNS2 312 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 IGKV1D-33P01593 117 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 IGKV1-33P01594 117 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 FAM106CPP0CH98 169 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 MBNL2Q5VZF2 373 aaKnown RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 BRD3OSQ6XYD6 125 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 FAM122BQ7Z309 247 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 MSRB3Q8IXL7 192 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 SAP25Q8TEE9 199 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 QTRT1Q9BXR0 403 aaKnown RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 RGPD5Q99666 1765 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 GGCTO75223 188 aaKnown RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 RPL27AP46776 148 aaKnown RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 NANOS3P60323 173 aaKnown RBP6.34□□□□□ -1.39
VPS13A-202ENST00000357409 OR4A5Q8NH83 315 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 ZNF426Q9BUY5 554 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 NAA60Q9H7X0 242 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 PIPOXQ9P0Z9 390 aa6.34□□□□□ -1.39
VPS13A-202ENST00000357409 C21orf140B9A014 251 aa6.34□□□□□ -1.4
VPS13A-202ENST00000357409 CELA3BP08861 270 aa6.34□□□□□ -1.4
VPS13A-202ENST00000357409 PPOXP50336 477 aa6.34□□□□□ -1.4
VPS13A-202ENST00000357409 ZNF329Q86UD4 541 aa6.34□□□□□ -1.4
VPS13A-202ENST00000357409 MYH1P12882 1939 aa6.34□□□□□ -1.4
VPS13A-202ENST00000357409 RPL24P83731 157 aaKnown RBP6.33□□□□□ -1.4
VPS13A-202ENST00000357409 WDR88Q6ZMY6 472 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 CARFQ8N187 725 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 NEURL2Q9BR09 285 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 ELOVL1Q9BW60 279 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 SSBP3Q9BWW4 388 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-202ENST00000357409 GON7Q9BXV9 100 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 CRYBB2P43320 205 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 KLRD1Q13241 179 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 C19orf54Q5BKX5 351 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 KLF14Q8TD94 323 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-202ENST00000357409 LINC00477Q96M19 166 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 MYH7P12883 1935 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 TRAV20A0A0B4J274 112 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 LOC107984156A0A0G2JMH3 177 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 ARL17AQ8IVW1 177 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 C1orf162Q8NEQ5 155 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-202ENST00000357409 ATG2BQ96BY7 2078 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 HIST3H3Q16695 136 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 TMEM177Q53S58 311 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 LEMD1Q68G75 181 aa6.33□□□□□ -1.4
VPS13A-202ENST00000357409 JMJD6Q6NYC1 403 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-202ENST00000357409 DPPA3Q6W0C5 159 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms