RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 ZNF429Q86V71 674 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 OR2M7Q8NG81 312 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 TTC28Q96AY4 2481 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 NAPSAO96009 420 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 PSG2P11465 335 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 PAX9P55771 341 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 LINC00205P59089 165 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 RPL23AP62750 156 aaKnown RBP12.99□□□□□ -0.33
PTBP1-203ENST00000356948 COLCA1Q6ZS62 124 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 ERRFI1Q9UJM3 462 aaPredicted RBP12.99□□□□□ -0.33
PTBP1-203ENST00000356948 CSMD1Q96PZ7 3565 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 TRAV24A0A0B4J272 114 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST1H2BKO60814 126 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST1H2BJP06899 126 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 CXCL1P09341 107 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST1H2BOP23527 126 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST1H2BBP33778 126 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST1H2BDP58876 126 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST1H2BCP62807 126 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 EIF3IQ13347 325 aaKnown RBP12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST2H2BEQ16778 126 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST1H2BHQ93079 126 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 SPSB4Q96A44 273 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 TMEM68Q96MH6 324 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST1H2BNQ99877 126 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HIST1H2BMQ99879 126 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 COLQQ9Y215 455 aaPredicted RBP12.98□□□□□ -0.33
PTBP1-203ENST00000356948 C6orf15Q6UXA7 325 aaPredicted RBP12.98□□□□□ -0.33
PTBP1-203ENST00000356948 Q8WTZ3 238 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 FAM210BQ96KR6 192 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 RSG1Q9BU20 258 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 ZNF703Q9H7S9 590 aaPredicted RBP12.98□□□□□ -0.33
PTBP1-203ENST00000356948 GNG13Q9P2W3 67 aa12.98□□□□□ -0.33
PTBP1-203ENST00000356948 HEATR1Q9H583 2144 aaKnown RBP12.98□□□□□ -0.33
PTBP1-203ENST00000356948 CNOT1A5YKK6 2376 aaKnown RBP12.98□□□□□ -0.33
PTBP1-203ENST00000356948 TK1P04183 234 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 IAPPP10997 89 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 ZNF16P17020 682 aaPredicted RBP12.97□□□□□ -0.33
PTBP1-203ENST00000356948 LMO1P25800 156 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 RND3P61587 244 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 CST9LP1Q5W188 147 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.97□□□□□ -0.33
PTBP1-203ENST00000356948 CABLES2Q9BTV7 478 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 PPP1R3CQ9UQK1 317 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 LAMTOR5O43504 91 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 RPP30P78346 268 aaKnown RBP12.97□□□□□ -0.33
PTBP1-203ENST00000356948 IL13RA2Q14627 380 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 ZNF100Q8IYN0 542 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 FAM185AQ8N0U4 392 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 FRZBQ92765 325 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 DEFB127Q9H1M4 99 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 PRDM13Q9H4Q3 707 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 TMED3Q9Y3Q3 217 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 ZNF318Q5VUA4 2279 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 A6NNC1 897 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 PGLYRP1O75594 196 aaPredicted RBP12.97□□□□□ -0.33
PTBP1-203ENST00000356948 FOLR2P14207 255 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 FGF8P55075 233 aaPredicted RBP12.97□□□□□ -0.33
PTBP1-203ENST00000356948 ARL16Q0P5N6 197 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 RNF151Q2KHN1 245 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 RIPPLY2Q5TAB7 128 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 SSX7Q7RTT5 188 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 ZDHHC23Q8IYP9 409 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 CYB561D1Q8N8Q1 229 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 MRPL30Q8TCC3 161 aaKnown RBP12.97□□□□□ -0.33
PTBP1-203ENST00000356948 TTTY12Q9BZ98 90 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 RNF122Q9H9V4 155 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 IL36GQ9NZH8 169 aa12.97□□□□□ -0.33
PTBP1-203ENST00000356948 CDS2O95674 445 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 FGF7P21781 194 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 FGF12P61328 243 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 PCBD1P61457 104 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 NMSQ5H8A3 153 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 WDR25Q64LD2 544 aaPredicted RBP12.96□□□□□ -0.33
PTBP1-203ENST00000356948 NCR3LG1Q68D85 454 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 CXorf67Q86X51 503 aaPredicted RBP12.96□□□□□ -0.33
PTBP1-203ENST00000356948 THNSL2Q86YJ6 484 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 KDF1Q8NAX2 398 aaPredicted RBP12.96□□□□□ -0.33
PTBP1-203ENST00000356948 PRDM14Q9GZV8 571 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 CD300LBA8K4G0 201 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 IGKV1-39P01597 117 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 IGKV1D-39P04432 117 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 IL2RGP31785 369 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 OR1C1Q15619 314 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 COMMD1Q8N668 190 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 TMEM251Q8N6I4 163 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 ELOVL1Q9BW60 279 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 WSB1Q9Y6I7 421 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 CEP250Q9BV73 2442 aa12.96□□□□□ -0.33
PTBP1-203ENST00000356948 SIRPB1O00241 398 aa12.96□□□□□ -0.34
PTBP1-203ENST00000356948 CEACAM21Q3KPI0 293 aa12.96□□□□□ -0.34
PTBP1-203ENST00000356948 TMPRSS7Q7RTY8 843 aa12.96□□□□□ -0.34
PTBP1-203ENST00000356948 A0A0U1RQK1 487 aa12.95□□□□□ -0.34
PTBP1-203ENST00000356948 TRAPPC2LH3BP13 241 aa12.95□□□□□ -0.34
PTBP1-203ENST00000356948 EREGO14944 169 aa12.95□□□□□ -0.34
PTBP1-203ENST00000356948 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
PTBP1-203ENST00000356948 TGOLN2O43493 480 aa12.95□□□□□ -0.34
PTBP1-203ENST00000356948 IGLV2-14P01704 120 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms