RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 IFT46Q9NQC8 304 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 ZNF69Q9UC07 566 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 PSG11Q9UQ72 335 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 FABP12A6NFH5 140 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 ODF3BA8MYP8 253 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 YPEL1O60688 119 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 CTXN2P0C2S0 81 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 SAA4P35542 130 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 IL18Q14116 193 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 LY6G6FQ5SQ64 297 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 RUSC1-AS1Q66K80 236 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 PIP4P2Q8N4L2 257 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 BEST4Q8NFU0 473 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 MAFIPQ8WZ33 124 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 YPEL2Q96QA6 119 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 FAM96BQ9Y3D0 163 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 TBL2Q9Y4P3 447 aaKnown RBP12.66□□□□□ -0.38
TRIM13-201ENST00000356017 IGHV3-43A0A0B4J1X8 118 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 A0A1W2PRD5 423 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 A0A1W2PRF3 423 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 A0A1W2PRM7 423 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 MEIOCA2RUB1 952 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 FAM172BPA6NC97 362 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 J3QR06 171 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 HSPA12AO43301 675 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 IGLV1-47P01700 117 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 GSTT2P0CG29 244 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 GSTT2BP0CG30 244 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 IGHV3-43DP0DP04 118 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 MORN2Q502X0 79 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 MINOS1Q5TGZ0 78 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 LURAP1LQ8IV03 231 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 OR52L2PQ8NGH6 319 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 GPX8Q8TED1 209 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 ABHD1Q96SE0 405 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 SLC23A1Q9UHI7 598 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 ANXA10Q9UJ72 324 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 MINOS1-NBL1R4GNA1 71 aa12.65□□□□□ -0.38
TRIM13-201ENST00000356017 HTR1DP28221 377 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 MADCAM1Q13477 382 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 HLA-DRB5Q30154 266 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 SPANXN2Q5MJ10 180 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 LINC00311Q8N616 119 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 GVQW1Q8N7I0 195 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 OR10V1Q8NGI7 309 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 OR6Q1Q8NGQ2 317 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 OR10J5Q8NHC4 309 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 FCAMRQ8WWV6 532 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 C22orf15Q8WYQ4 148 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 GCDHQ92947 438 aaPredicted RBP12.64□□□□□ -0.39
TRIM13-201ENST00000356017 LEAP2Q969E1 77 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 CABLES2Q9BTV7 478 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 MMP28Q9H239 520 aa12.64□□□□□ -0.39
TRIM13-201ENST00000356017 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
TRIM13-201ENST00000356017 IGKV1D-8A0A087WSZ0 117 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 TRBV6-7A0A0A0MS04 114 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 GABARAPH6UMI1 98 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 BET1O15155 118 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 CTDSPLO15194 276 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 IGHV3-7P01780 117 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 FBP1P09467 338 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 PTBP1P26599 531 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM13-201ENST00000356017 CEACAM3P40198 252 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 CEACAM6P40199 344 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 GNG10P50151 68 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 ARPC4P59998 168 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 IGSF11Q5DX21 431 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 FAM131AQ6UXB0 335 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 LINC00299Q6ZSB3 139 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 C5orf24Q7Z6I8 188 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 CCDC190Q86UF4 302 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 OR2AK2Q8NG84 335 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 OR4P4Q8NGL7 312 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 OR10X1Q8NGY0 326 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 EDARADDQ8WWZ3 215 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 MALSU1Q96EH3 234 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 SOSTQ9BQB4 213 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 DPM3Q9P2X0 92 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 ANAPC10Q9UM13 185 aa12.63□□□□□ -0.39
TRIM13-201ENST00000356017 SONP18583 2426 aaKnown RBP12.63□□□□□ -0.39
TRIM13-201ENST00000356017 IGKV1-6A0A0C4DH72 117 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 MEIS3P1A6NDR6 274 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 LEUTXA8MZ59 168 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 BUB1B-PAK6H3BSN5 160 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 RBBP9O75884 186 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 NAT1P18440 290 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 PPP1CCP36873 323 aaKnown RBP12.62□□□□□ -0.39
TRIM13-201ENST00000356017 ETV6P41212 452 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 ACTBP60709 375 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 ACTG1P63261 375 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 HERPUD1Q15011 391 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 UTF1Q5T230 341 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 RBMS3Q6XE24 437 aaKnown RBP12.62□□□□□ -0.39
TRIM13-201ENST00000356017 SLC25A48Q6ZT89 311 aaKnown RBP12.62□□□□□ -0.39
TRIM13-201ENST00000356017 BCL6BQ8N143 479 aaPredicted RBP12.62□□□□□ -0.39
TRIM13-201ENST00000356017 GINS4Q9BRT9 223 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 GHITMQ9H3K2 345 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 PTTG2Q9NZH5 202 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 A0A0U1RQK1 487 aa12.62□□□□□ -0.39
TRIM13-201ENST00000356017 ITGB1BP1O14713 200 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms