RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 HIGD1AQ9Y241 93 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 SIRT4Q9Y6E7 314 aaPredicted RBP11.47□□□□□ -0.57
SCN8A-202ENST00000355133 SCN3AQ9NY46 2000 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 ZNF137PP52743 207 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 IGSF11Q5DX21 431 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 DDA1Q9BW61 102 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 MCM3APO60318 1980 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 PRR33A8MZF0 331 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 KCNAB3O43448 404 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 HBZP02008 142 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 ID4P47928 161 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 PNRC1Q12796 327 aaPredicted RBP11.47□□□□□ -0.57
SCN8A-202ENST00000355133 PRNTQ86SH4 94 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 OR2D3Q8NGH3 330 aa11.47□□□□□ -0.57
SCN8A-202ENST00000355133 SF3B6Q9Y3B4 125 aaKnown RBP11.47□□□□□ -0.57
SCN8A-202ENST00000355133 LTBP4Q8N2S1 1624 aa11.46□□□□□ -0.57
SCN8A-202ENST00000355133 CXorf1O96002 111 aa11.46□□□□□ -0.57
SCN8A-202ENST00000355133 CEBPDP49716 269 aaPredicted RBP11.46□□□□□ -0.57
SCN8A-202ENST00000355133 PSMB2P49721 201 aa11.46□□□□□ -0.57
SCN8A-202ENST00000355133 LOXL4Q96JB6 756 aa11.46□□□□□ -0.57
SCN8A-202ENST00000355133 OPN4Q9UHM6 478 aa11.46□□□□□ -0.57
SCN8A-202ENST00000355133 ZNF107Q9UII5 783 aaPredicted RBP11.46□□□□□ -0.57
SCN8A-202ENST00000355133 PILRBQ9UKJ0 227 aa11.46□□□□□ -0.57
SCN8A-202ENST00000355133 TRIP11Q15643 1979 aa11.46□□□□□ -0.57
SCN8A-202ENST00000355133 CDS2O95674 445 aa11.46□□□□□ -0.58
SCN8A-202ENST00000355133 SP9P0CG40 484 aa11.46□□□□□ -0.58
SCN8A-202ENST00000355133 RPL29P47914 159 aaKnown RBP11.46□□□□□ -0.58
SCN8A-202ENST00000355133 P2RY6Q15077 328 aa11.46□□□□□ -0.58
SCN8A-202ENST00000355133 LRP11Q86VZ4 500 aa11.46□□□□□ -0.58
SCN8A-202ENST00000355133 MFSD2BA6NFX1 497 aa11.46□□□□□ -0.58
SCN8A-202ENST00000355133 PGA4P0DJD7 388 aa11.46□□□□□ -0.58
SCN8A-202ENST00000355133 SCGB1D4Q6XE38 83 aa11.46□□□□□ -0.58
SCN8A-202ENST00000355133 SAP25Q8TEE9 199 aa11.46□□□□□ -0.58
SCN8A-202ENST00000355133 AHRRA9YTQ3 701 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 PRDM6Q9NQX0 595 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 A0A1W2PPC1 479 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 MGST3O14880 152 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 OR2H2O95918 312 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 HPRT1P00492 218 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 NGFRP08138 427 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 FGF5P12034 268 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 PPOXP50336 477 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 CDCP2Q5VXM1 449 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 Q6ZN92 141 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 LYRM2Q9NU23 88 aaPredicted RBP11.45□□□□□ -0.58
SCN8A-202ENST00000355133 NCMAPQ5T1S8 102 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 PLA2G10O15496 165 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 PDE6DO43924 150 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 SMPD2O60906 423 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 HOXD4P09016 255 aaPredicted RBP11.45□□□□□ -0.58
SCN8A-202ENST00000355133 NAT2P11245 290 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 ROM1Q03395 351 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 FAM216AQ8WUB2 273 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 DIRC2Q96SL1 478 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 NUDT16L1Q9BRJ7 211 aaKnown RBP11.45□□□□□ -0.58
SCN8A-202ENST00000355133 A0A0U1RQV5 110 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 A0A1W2PP11 408 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 GAPDHP04406 335 aaKnown RBP11.45□□□□□ -0.58
SCN8A-202ENST00000355133 GUCA2BQ16661 112 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 PAXXQ9BUH6 204 aa11.45□□□□□ -0.58
SCN8A-202ENST00000355133 METTL1Q9UBP6 276 aaKnown RBP11.45□□□□□ -0.58
SCN8A-202ENST00000355133 CTSBP07858 339 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 PF4V1P10720 104 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 IER3P46695 156 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 RAB33BQ9H082 229 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 GHITMQ9H3K2 345 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 CYB5R3P00387 301 aaPredicted RBP11.44□□□□□ -0.58
SCN8A-202ENST00000355133 AREGP15514 252 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 RPL27AP46776 148 aaKnown RBP11.44□□□□□ -0.58
SCN8A-202ENST00000355133 EIF4EBP2Q13542 120 aaPredicted RBP11.44□□□□□ -0.58
SCN8A-202ENST00000355133 ELOBQ15370 118 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 PRSS53Q2L4Q9 553 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 SPANXN1Q5VSR9 72 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 HCP5Q6MZN7 132 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 GUCD1Q96NT3 240 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 SPAG17Q6Q759 2223 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 TMEM218A2RU14 115 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 STARD6P59095 220 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 HERVK_113P61574 105 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 CEBPEQ15744 281 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 C19orf48Q6RUI8 117 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 GBGT1Q8N5D6 347 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 MAP1LC3CQ9BXW4 147 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 FUT9Q9Y231 359 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 WISP3O95389 354 aaPredicted RBP11.44□□□□□ -0.58
SCN8A-202ENST00000355133 SCTP09683 121 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 RCC1P18754 421 aaPredicted RBP11.44□□□□□ -0.58
SCN8A-202ENST00000355133 FGF12P61328 243 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 STXBP6Q8NFX7 210 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 AMELYQ99218 206 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 HS3ST3B1Q9Y662 390 aa11.44□□□□□ -0.58
SCN8A-202ENST00000355133 HYPMO75409 117 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 ATP6V0CP27449 155 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 ZNF841Q6ZN19 808 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 OVCH2Q7RTZ1 564 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 MRGPRGQ86SM5 289 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 CBLN2Q8IUK8 224 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 OR8A1Q8NGG7 326 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 ANGPTL6Q8NI99 470 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms