RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 HEATR1Q9H583 2144 aaKnown RBP10.39□□□□□ -0.75
TRAF3-201ENST00000347662 GLRX2Q9NS18 164 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 MYO7BQ6PIF6 2116 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 C3AR1Q16581 482 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 NSUN5P2Q63ZY6 315 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 OR4A5Q8NH83 315 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 INHBBP09529 407 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 RBM11P57052 281 aaKnown RBP10.39□□□□□ -0.75
TRAF3-201ENST00000347662 SNAI3Q3KNW1 292 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 DOK1Q99704 481 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 ALX4Q9H161 411 aaPredicted RBP10.39□□□□□ -0.75
TRAF3-201ENST00000347662 IGKV3D-20A0A0C4DH25 116 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 CTSVO60911 334 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 PABPC1L2AQ5JQF8 200 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 ABLIM2Q6H8Q1 611 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 PP6455Q8WZ26 134 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 MARVELD3Q96A59 401 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 GUCD1Q96NT3 240 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 HSF4Q9ULV5 492 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 SAXO2Q658L1 398 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 MRM1Q6IN84 353 aaKnown RBP10.38□□□□□ -0.75
TRAF3-201ENST00000347662 MMP25Q9NPA2 562 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 PYCARD-AS1I3L0S3 204 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 FTH1P19P0C7X4 201 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 UQCC3Q6UW78 93 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 ABHD14BQ96IU4 210 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 TMEM56-RWDD3S4R434 201 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 WNK2Q9Y3S1 2297 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 TRA2AQ13595 282 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRAF3-201ENST00000347662 CNRIP1Q96F85 164 aaPredicted RBP10.38□□□□□ -0.75
TRAF3-201ENST00000347662 GPR82Q96P67 336 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 COL5A3P25940 1745 aaPredicted RBP10.38□□□□□ -0.75
TRAF3-201ENST00000347662 MPV17LQ2QL34 196 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 TMEM255AQ5JRV8 349 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 TMEM136Q6ZRR5 245 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 B4DEV8 164 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 C5orf67F2Z3F1 127 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 PRDX2P32119 198 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 ACER2Q5QJU3 275 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 CFAP161Q6P656 301 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 GPX2P18283 190 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 OR10D3Q8NH80 312 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 JKAMPQ9P055 326 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 FER1L5A0AVI2 2057 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 SHANK3Q9BYB0 1731 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 FAM106CPP0CH98 169 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 NCMAPQ5T1S8 102 aa10.38□□□□□ -0.75
TRAF3-201ENST00000347662 TRAV12-3A0A0B4J271 114 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 TRBV5-4A0A0C4DH59 114 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 OR4C45A6NMZ5 311 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 CTF1Q16619 201 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 C2orf88Q9BSF0 95 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 COL4A5P29400 1685 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 RER1O15258 196 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 CHST1O43916 411 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 ZNF32P17041 273 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 ZNF658BQ4V348 819 aaPredicted RBP10.37□□□□□ -0.75
TRAF3-201ENST00000347662 ABCA4P78363 2273 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 LINC01387J3KSC0 135 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 STARD6P59095 220 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 CX3CL1P78423 397 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 ZNF383Q8NA42 475 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 RAB24Q969Q5 203 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 NRTNQ99748 197 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 B9D1Q9UPM9 204 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 A0A1W2PRX2 142 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 RBMY1BA6NDE4 496 aaKnown RBP10.37□□□□□ -0.75
TRAF3-201ENST00000347662 RBMY1EA6NEQ0 496 aaKnown RBP10.37□□□□□ -0.75
TRAF3-201ENST00000347662 RBMY1DP0C7P1 496 aaKnown RBP10.37□□□□□ -0.75
TRAF3-201ENST00000347662 RBMY1A1P0DJD3 496 aaKnown RBP10.37□□□□□ -0.75
TRAF3-201ENST00000347662 RBMY1CP0DJD4 496 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 OR10J1P30954 320 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 CCDC144NLQ6NUI1 221 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 OR1L8Q8NGR8 309 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 APOBEC4Q8WW27 367 aaKnown RBP10.37□□□□□ -0.75
TRAF3-201ENST00000347662 SPSB1Q96BD6 273 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 IFT22Q9H7X7 185 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 TGFAP01135 160 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 PTHLHP12272 177 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 ERVFRD-1P60508 538 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 IL24Q13007 206 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 C10orf128Q5T292 105 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 TSPAN32Q96QS1 320 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 FAM60AQ9NP50 221 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 PLXNA1Q9UIW2 1896 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 A0A087WUJ7 227 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 GPX1P07203 203 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 PATE4P0C8F1 98 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 SAA1P0DJI8 122 aaPredicted RBP10.37□□□□□ -0.75
TRAF3-201ENST00000347662 SSPNQ14714 243 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 SLC23A3Q6PIS1 610 aa10.37□□□□□ -0.75
TRAF3-201ENST00000347662 FABP5Q01469 135 aa10.36□□□□□ -0.75
TRAF3-201ENST00000347662 PAXXQ9BUH6 204 aa10.36□□□□□ -0.75
TRAF3-201ENST00000347662 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
TRAF3-201ENST00000347662 OTX1P32242 354 aaPredicted RBP10.36□□□□□ -0.75
TRAF3-201ENST00000347662 FAM219BQ5XKK7 198 aa10.36□□□□□ -0.75
TRAF3-201ENST00000347662 ERASQ7Z444 233 aa10.36□□□□□ -0.75
TRAF3-201ENST00000347662 PIMREGQ9BSJ6 248 aa10.36□□□□□ -0.75
TRAF3-201ENST00000347662 RBFOX3A6NFN3 312 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms