RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 OTOGLQ3ZCN5 2332 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 ZFP92A6NM28 416 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 SHISA8B8ZZ34 492 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 H7BYZ3 331 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 KBTBD11O94819 623 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 FTH1P19P0C7X4 201 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 SFTPCP11686 197 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 CRYGSP22914 178 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 PAX9P55771 341 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 ERVFC1-1P60608 527 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 MRPS34P82930 218 aaKnown RBP13.58□□□□□ -0.23
HMGA1-202ENST00000347617 CLN3Q13286 438 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 TMEM41BQ5BJD5 291 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 FAM27BQ5VT28 67 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 PRAMEF20Q5VT98 475 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 CISD2Q8N5K1 135 aaKnown RBP13.58□□□□□ -0.23
HMGA1-202ENST00000347617 TMEM217Q8N7C4 229 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 ZNF442Q9H7R0 627 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 RPRMQ9NS64 109 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 PRSS50Q9UI38 385 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 GAB2Q9UQC2 676 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 TIMM9Q9Y5J7 89 aa13.58□□□□□ -0.23
HMGA1-202ENST00000347617 DMDP11532 3685 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 KIR2DS1A0A191URI9 304 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 A0A1W2PNR3 127 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 ZIC3O60481 467 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 TUSC2O75896 110 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 CNOT4O95628 575 aaKnown RBP13.58□□□□□ -0.24
HMGA1-202ENST00000347617 HRASP01112 189 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 GLI4P10075 376 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 SRD5A2P31213 254 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 MDH2P40926 338 aaKnown RBP13.58□□□□□ -0.24
HMGA1-202ENST00000347617 KIR2DS4P43632 304 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 CYB561P49447 251 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 CLDN15P56746 228 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 HBG1P69891 147 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 HBG2P69892 147 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 KIR2DS1Q14954 304 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 BSXQ3C1V8 233 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 SPIN3Q5JUX0 258 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 C16orf82Q7Z2V1 217 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 DTX1Q86Y01 620 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 DEFB124Q8NES8 71 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 Q8NFD4 153 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 FER1L6-AS2Q96M78 137 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 SLC7A10Q9NS82 523 aa13.58□□□□□ -0.24
HMGA1-202ENST00000347617 IGKV1-27A0A075B6S5 117 aa13.57□□□□□ -0.24
HMGA1-202ENST00000347617 ZNF705GA8MUZ8 300 aaPredicted RBP13.57□□□□□ -0.24
HMGA1-202ENST00000347617 DNPH1O43598 174 aa13.57□□□□□ -0.24
HMGA1-202ENST00000347617 TMEM50AO95807 157 aa13.57□□□□□ -0.24
HMGA1-202ENST00000347617 NRASP01111 189 aa13.57□□□□□ -0.24
HMGA1-202ENST00000347617 DCAF10Q5QP82 559 aa13.57□□□□□ -0.24
HMGA1-202ENST00000347617 OR51G1Q8NGK1 321 aa13.57□□□□□ -0.24
HMGA1-202ENST00000347617 SMIM7Q9BQ49 75 aa13.57□□□□□ -0.24
HMGA1-202ENST00000347617 ZNF665Q9H7R5 613 aa13.57□□□□□ -0.24
HMGA1-202ENST00000347617 LAMP3Q9UQV4 416 aa13.57□□□□□ -0.24
HMGA1-202ENST00000347617 FAM221AA4D161 298 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 GJE1A6NN92 205 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 CEBPZOSA8MTT3 80 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 ZNF814B7Z6K7 855 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 GALR1P47211 349 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 RAC1P63000 192 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 PIGYQ3MUY2 71 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 ACTL10Q5JWF8 245 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 C1orf194Q5T5A4 169 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 ZNF468Q5VIY5 522 aaPredicted RBP13.56□□□□□ -0.24
HMGA1-202ENST00000347617 ZNF880Q6PDB4 577 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 BTNL3Q6UXE8 466 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 ZNF66Q6ZN08 573 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 C5orf24Q7Z6I8 188 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 THOC3Q96J01 351 aaKnown RBP13.56□□□□□ -0.24
HMGA1-202ENST00000347617 IMMP2LQ96T52 175 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 ABI3Q9P2A4 366 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 CBY1Q9Y3M2 126 aa13.56□□□□□ -0.24
HMGA1-202ENST00000347617 VENTXO95231 258 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 CST2P09228 141 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 LCN2P80188 198 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 PAX5Q02548 391 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 GAGE1Q13065 139 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 ADIRFQ15847 76 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 LRRC75BQ2VPJ9 315 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 SNAI3Q3KNW1 292 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 DMRTC1Q5HYR2 192 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 KCNIP4Q6PIL6 250 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 KCNE4Q8WWG9 221 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 LSM10Q969L4 123 aaKnown RBP13.55□□□□□ -0.24
HMGA1-202ENST00000347617 RIMS4Q9H426 269 aaPredicted RBP13.55□□□□□ -0.24
HMGA1-202ENST00000347617 TAAR3PQ9P1P4 343 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 WDFY4Q6ZS81 3184 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 IGKV1-12A0A0C4DH73 117 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 KIR2DL5BA0A0G2JN68 375 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 KIR2DL5BA0A0G2JPC4 375 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 MAP1LC3B2A6NCE7 125 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 TMEM210A6NLX4 147 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 NPIPA2E9PIF3 369 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 NPIPA3F8WFD2 350 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 IL18BPO95998 194 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 IGKV1D-12P01611 117 aa13.55□□□□□ -0.24
HMGA1-202ENST00000347617 SNRPCP09234 159 aaKnown RBP13.55□□□□□ -0.24
HMGA1-202ENST00000347617 SOX8P57073 446 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms