RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TMEM218A2RU14 115 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 FAM74A7A6NL05 159 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 PRR32B1ATL7 298 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 IGHV3-43DP0DP04 118 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 FAM74A3Q4VXF1 159 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 FNDC7Q5VTL7 733 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 C3orf56Q8N813 242 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 OR2J1Q9GZK6 312 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 TPRP12270 2363 aaKnown RBP9.43□□□□□ -0.9
CLCN6-202ENST00000346436 K7N7A8 449 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 TMEM33P57088 247 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 LYZP61626 148 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 PLPPR5Q32ZL2 321 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 PRSS54Q6PEW0 395 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 STPG2Q8N412 459 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 HARBI1Q96MB7 349 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 C7orf69Q9H7B7 122 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 FAM181BA6NEQ2 426 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 CD59P13987 128 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 KIR2DL2P43627 348 aaPredicted RBP9.42□□□□□ -0.9
CLCN6-202ENST00000346436 LPAR6P43657 344 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 OR1A1Q9P1Q5 309 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 FAM24AA6NFZ4 105 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 NUTF2P61970 127 aaKnown RBP9.42□□□□□ -0.9
CLCN6-202ENST00000346436 GUK1Q16774 197 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 OR1K1Q8NGR3 316 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 RNF133Q8WVZ7 376 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 COL25A1Q9BXS0 654 aaPredicted RBP9.42□□□□□ -0.9
CLCN6-202ENST00000346436 PLEKHA2Q9HB19 425 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 TUBD1Q9UJT1 453 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 TNFSF18Q9UNG2 199 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 GAB2Q9UQC2 676 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 CD200P41217 278 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 EFNB1P98172 346 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 LY6EQ16553 131 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 ITLN1Q8WWA0 313 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 SOSTQ9BQB4 213 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 MED9Q9NWA0 146 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 NAGKQ9UJ70 344 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 MMP24Q9Y5R2 645 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 ZNF705FA8MVS1 300 aaPredicted RBP9.42□□□□□ -0.9
CLCN6-202ENST00000346436 ZNF705DP0CH99 300 aaPredicted RBP9.42□□□□□ -0.9
CLCN6-202ENST00000346436 ZNF705BP0CI00 300 aaPredicted RBP9.42□□□□□ -0.9
CLCN6-202ENST00000346436 TNFSF10P50591 281 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 TEX30Q5JUR7 227 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 FAM24BQ8N5W8 94 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 MRPL24Q96A35 216 aaKnown RBP9.42□□□□□ -0.9
CLCN6-202ENST00000346436 VWCEQ96DN2 955 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 TCEAL7Q9BRU2 100 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 UQCC1Q9NVA1 299 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 AUP1Q9Y679 476 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 ASXL3Q9C0F0 2248 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 COL4A6Q14031 1691 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 MFSD2BA6NFX1 497 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 SEC14L6B5MCN3 397 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 CELA2AP08217 269 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 PRDX2P32119 198 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 BATFQ16520 125 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 WFDC3Q8IUB2 231 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 OR8I2Q8N0Y5 310 aa9.42□□□□□ -0.9
CLCN6-202ENST00000346436 C1orf162Q8NEQ5 155 aaPredicted RBP9.42□□□□□ -0.9
CLCN6-202ENST00000346436 PROB1E7EW31 1015 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 J3QW42 95 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 SS18L1O75177 396 aaPredicted RBP9.41□□□□□ -0.9
CLCN6-202ENST00000346436 CST4P01036 141 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 SSTP61278 116 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 UQCC3Q6UW78 93 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 ZBTB34Q8NCN2 500 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 OR5AC2Q9NZP5 309 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 HILPDAQ9Y5L2 63 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 TRBV5-7A0A0A0MS05 114 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 GYPAP02724 150 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 RPL30P62888 115 aaKnown RBP9.41□□□□□ -0.9
CLCN6-202ENST00000346436 ZNF439Q8NDP4 499 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 GPX7Q96SL4 187 aaPredicted RBP9.41□□□□□ -0.9
CLCN6-202ENST00000346436 NPAS1Q99742 590 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 IGLV1-36A0A0B4J1U3 117 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 UNQ5815/PRO19632Q6UWF5 114 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 SSX7Q7RTT5 188 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 ZNF485Q8NCK3 441 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 SLC45A2Q9UMX9 530 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 GEMIN2O14893 280 aaKnown RBP9.41□□□□□ -0.9
CLCN6-202ENST00000346436 CD1AP06126 327 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 ACAA1P09110 424 aaPredicted RBP9.41□□□□□ -0.9
CLCN6-202ENST00000346436 NHLRC3Q5JS37 347 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 FAM166AQ6J272 317 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 SLC16A13Q7RTY0 426 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 CCL13Q99616 98 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 NPDC1Q9NQX5 325 aaPredicted RBP9.41□□□□□ -0.9
CLCN6-202ENST00000346436 CBLN4Q9NTU7 201 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 RASL12Q9NYN1 266 aa9.41□□□□□ -0.9
CLCN6-202ENST00000346436 RALYQ9UKM9 306 aaKnown RBP9.41□□□□□ -0.9
CLCN6-202ENST00000346436 DXOO77932 396 aaKnown RBP9.4□□□□□ -0.9
CLCN6-202ENST00000346436 GNLYP22749 145 aa9.4□□□□□ -0.9
CLCN6-202ENST00000346436 RPEL1Q2QD12 228 aa9.4□□□□□ -0.9
CLCN6-202ENST00000346436 OR1L8Q8NGR8 309 aa9.4□□□□□ -0.9
CLCN6-202ENST00000346436 FGF7P21781 194 aa9.4□□□□□ -0.9
CLCN6-202ENST00000346436 GCSHP23434 173 aa9.4□□□□□ -0.9
CLCN6-202ENST00000346436 PIGYQ3MUY2 71 aa9.4□□□□□ -0.9
CLCN6-202ENST00000346436 CYB5R2Q6BCY4 276 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms