RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 SPCS3P61009 180 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 PCSK4Q6UW60 755 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 YRDCQ86U90 279 aaKnown RBP15.16■□□□□ 0.02
VHL-202ENST00000345392 WFIKKN1Q96NZ8 548 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 RAB40CQ96S21 281 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 C19orf25Q9UFG5 118 aaPredicted RBP15.16■□□□□ 0.02
VHL-202ENST00000345392 ERRFI1Q9UJM3 462 aaPredicted RBP15.16■□□□□ 0.02
VHL-202ENST00000345392 TP53TG5Q9Y2B4 290 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 ATP23Q9Y6H3 246 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 A0A1W2PPQ1 181 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 SYNGR2O43760 224 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 PCOLCEQ15113 449 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 TMEM241Q24JQ0 296 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 Q6ZS49 121 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 AAED1Q7RTV5 226 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 OR56B2PQ8NGI1 322 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 OR51G1Q8NGK1 321 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 IL1F10Q8WWZ1 152 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 LHX4Q969G2 390 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 DDA1Q9BW61 102 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 NAT8Q9UHE5 227 aa15.16■□□□□ 0.02
VHL-202ENST00000345392 LRRC3CA6NJW4 275 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 PPP5D1E7EU14 171 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 HS3ST1O14792 307 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 MMP7P09237 267 aaPredicted RBP15.15■□□□□ 0.02
VHL-202ENST00000345392 GALR1P47211 349 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 IDH3GP51553 393 aaPredicted RBP15.15■□□□□ 0.02
VHL-202ENST00000345392 RAC1P63000 192 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 BSXQ3C1V8 233 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 KRTAP27-1Q3LI81 207 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 TRIM61Q5EBN2 209 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 CPEB3Q8NE35 698 aaKnown RBP15.15■□□□□ 0.02
VHL-202ENST00000345392 MTCH1Q9NZJ7 389 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 IGKV1D-33P01593 117 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 IGKV1-33P01594 117 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 IGKV1-39P01597 117 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 IGKV1D-39P04432 117 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 SPANXN5Q5MJ07 72 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 IL22RA2Q969J5 263 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 NOL4LQ96MY1 436 aaPredicted RBP15.15■□□□□ 0.02
VHL-202ENST00000345392 OR4C12Q96R67 309 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 FUT9Q9Y231 359 aa15.15■□□□□ 0.02
VHL-202ENST00000345392 A0A0G2JMM0 328 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 KIR2DS1A0A191URI9 304 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 A0A1W2PPB8 328 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 A0A1W2PRS3 328 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 KIR3DP1A8MWS1 328 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 OR4A8P0C604 315 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 KIR2DS4P43632 304 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 CASP6P55212 293 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 RPL23P62829 140 aaKnown RBP15.14■□□□□ 0.01
VHL-202ENST00000345392 KIR2DS1Q14954 304 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 LRRC75BQ2VPJ9 315 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 LBHQ53QV2 105 aaPredicted RBP15.14■□□□□ 0.01
VHL-202ENST00000345392 RPP25LQ8N5L8 163 aaKnown RBP15.14■□□□□ 0.01
VHL-202ENST00000345392 CPT1CQ8TCG5 803 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 GATAD1Q8WUU5 269 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 RDH5Q92781 318 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 RAB24Q969Q5 203 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 ZNF488Q96MN9 340 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 NEU1Q99519 415 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 SLC39A9Q9NUM3 307 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 PLA2G3Q9NZ20 509 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 ZNF391Q9UJN7 358 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 TRAV39A0A0B4J263 110 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 H7BYZ3 331 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 ZNF16P17020 682 aaPredicted RBP15.14■□□□□ 0.01
VHL-202ENST00000345392 CLDN15P56746 228 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 FGF12P61328 243 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 PMS2P11Q13670 270 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 RNPS1Q15287 305 aaKnown RBP15.14■□□□□ 0.01
VHL-202ENST00000345392 TMEM41BQ5BJD5 291 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 PCED1AQ9H1Q7 454 aa15.14■□□□□ 0.01
VHL-202ENST00000345392 UBE2L5PA0A1B0GUS4 154 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 GALR2O43603 387 aaPredicted RBP15.13■□□□□ 0.01
VHL-202ENST00000345392 CXCL13O43927 109 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 EPHA8P29322 1005 aaPredicted RBP15.13■□□□□ 0.01
VHL-202ENST00000345392 NUBP1P53384 320 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 CARD18P57730 90 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 GNB2P62879 340 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 MEF2BQ02080 365 aaPredicted RBP15.13■□□□□ 0.01
VHL-202ENST00000345392 PRDX4Q13162 271 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 SLC10A1Q14973 349 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 C9orf135Q5VTT2 229 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 MRPL14Q6P1L8 145 aaKnown RBP15.13■□□□□ 0.01
VHL-202ENST00000345392 PRR18Q8N4B5 295 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 OR5T1Q8NG75 326 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 PYGO2Q9BRQ0 406 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 CD300LBA8K4G0 201 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 PDGFBP01127 241 aaPredicted RBP15.13■□□□□ 0.01
VHL-202ENST00000345392 UMODP07911 640 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 CCL4P13236 92 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 RAC3P60763 192 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 OR8G2PQ6IF36 304 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 CYP2G1PQ6ZSU1 146 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 OR10J5Q8NHC4 309 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 UBALD1Q8TB05 177 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 OR5B12Q96R08 314 aa15.13■□□□□ 0.01
VHL-202ENST00000345392 PSMG3Q9BT73 122 aaPredicted RBP15.13■□□□□ 0.01
VHL-202ENST00000345392 PPP1R3CQ9UQK1 317 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms