RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 BCL7BQ9BQE9 202 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 Q9N2K0 584 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 ELF5Q9UKW6 265 aaPredicted RBP16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 LEUTXA8MZ59 168 aa16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 SOX6P35712 828 aa16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 CEACAM3P40198 252 aa16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 LDLRAD2Q5SZI1 272 aa16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 FAM53AQ6NSI3 398 aaPredicted RBP16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 IZUMO1Q8IYV9 350 aa16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 TMEM158Q8WZ71 300 aa16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 AP3S1Q92572 193 aa16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 MEGF9Q9H1U4 602 aa16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 AMMECR1Q9Y4X0 333 aaPredicted RBP16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 POMT1Q9Y6A1 747 aa16.86■□□□□ 0.29
SMARCB1-202ENST00000344921 A0A0A6YYH2 397 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 TMEM235A6NFC5 223 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 A6NJ64 397 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 POM121CA8CG34 1229 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 BUB1B-PAK6H3BSN5 160 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 GSTP1P09211 210 aaKnown RBP16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 ZNF182P17025 639 aaPredicted RBP16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 HACD4Q5VWC8 232 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 MZT2AQ6P582 158 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 DYNAPQ8N1N2 210 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 OR52L2PQ8NGH6 319 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 ISOC1Q96CN7 298 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 ABCG5Q9H222 651 aa16.85■□□□□ 0.29
SMARCB1-202ENST00000344921 CLDN34H7C241 214 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 FCGR3AP08637 254 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 GNG2P59768 71 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 HLA-DRB3P79483 266 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 HTD2P86397 168 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 LRRC75BQ2VPJ9 315 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 CNPY1Q3B7I2 92 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 ZNF260Q3ZCT1 412 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 TMEM86BQ8N661 226 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 ABCB10Q9NRK6 738 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 ZNF230Q9UIE0 474 aaPredicted RBP16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 JPT1Q9UK76 154 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 RNF212BA8MTL3 300 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 H3BUX3 64 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 DTX3Q8N9I9 347 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 MAFIPQ8WZ33 124 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 CHIAQ9BZP6 476 aa16.84■□□□□ 0.29
SMARCB1-202ENST00000344921 TRDCB7Z8K6 153 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 H3BMQ9 156 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 HSPA12AO43301 675 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 RGS11O94810 467 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 RNASE1P07998 156 aaKnown RBP16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 SCTP09683 121 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 PPP1CCP36873 323 aaKnown RBP16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 MNDAP41218 407 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 PITPNAQ00169 270 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 GNMTQ14749 295 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 KRTAP21-3Q3LHN1 58 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 KRTAP24-1Q3LI83 254 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 MORN2Q502X0 79 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 NUDCD2Q8WVJ2 157 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 RPEQ96AT9 228 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 SLC23A1Q9UHI7 598 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 CEPT1Q9Y6K0 416 aa16.83■□□□□ 0.28
SMARCB1-202ENST00000344921 KIR2DS4P43632 304 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 RAB13P51153 203 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 ARHGDIBP52566 201 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 MADCAM1Q13477 382 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 KIR2DS1Q14954 304 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 PNLIPRP3Q17RR3 467 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 Q3ZCU0 254 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 TMEM69Q5SWH9 247 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 C16orf87Q6PH81 154 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 OR5R1Q8NH85 324 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 FAM216AQ8WUB2 273 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 ST6GALNAC5Q9BVH7 336 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 XRCC3O43542 346 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 HPGDSO60760 199 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 LSAMPQ13449 338 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 LY6EQ16553 131 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 TPTE2P1Q5T6R2 138 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 STEAP3Q658P3 488 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 TOMM40LQ969M1 308 aa16.82■□□□□ 0.28
SMARCB1-202ENST00000344921 ATRQ13535 2644 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 YPEL1O60688 119 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 APOA1P02647 267 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 EIF4EP06730 217 aaKnown RBP16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 ZBTB25P24278 435 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 ACTG1P63261 375 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 AANATQ16613 207 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 LINC00311Q8N616 119 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 C8orf31Q8N9H6 132 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 CMTM3Q96MX0 182 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 YPEL2Q96QA6 119 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 OCSTAMPQ9BR26 566 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 VPREB3Q9UKI3 123 aa16.81■□□□□ 0.28
SMARCB1-202ENST00000344921 FAM25AB3EWG3 89 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 FAM25CB3EWG5 89 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 FAM25GB3EWG6 89 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 SLC31A2O15432 143 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 FABP7O15540 132 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 CRYBA1P05813 215 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms