RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 GAR1Q9NY12 217 aaKnown RBP14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 PLXNA3P51805 1871 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 FOXF2Q12947 444 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 BAP18Q8IXM2 172 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 RFLNBQ8N5W9 214 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 OR1L4Q8NGR5 311 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 ABHD1Q96SE0 405 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 RSRP1Q9BUV0 290 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 LY6G6EA0A0G2JKS1 128 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 ZNF320A2RRD8 509 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 IGHV1-2P23083 117 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 TUBD1Q9UJT1 453 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 U3KQA8 63 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 LEUTXA8MZ59 168 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 UMAD1C9J7I0 102 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 MT-ND4LP03901 98 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 MPPED2Q15777 294 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 ADIRFQ15847 76 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 C11orf87Q6NUJ2 197 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 DBX2Q6ZNG2 339 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 A0A1W2PPE3 182 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 CDRT15L2A8MXV6 281 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 ONECUT2O95948 504 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 C1QTNF12Q5T7M4 302 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 SP5Q6BEB4 398 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 OR10Z1Q8NGY1 313 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 GNG13Q9P2W3 67 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 LRRC3CA6NJW4 275 aa14.09□□□□□ -0.15
SMARCA4-201ENST00000344626 CEP295Q9C0D2 2601 aa14.08□□□□□ -0.15
SMARCA4-201ENST00000344626 LIPFP07098 398 aa14.08□□□□□ -0.15
SMARCA4-201ENST00000344626 MUC1P15941 1255 aaPredicted RBP14.08□□□□□ -0.15
SMARCA4-201ENST00000344626 AKR1C3P42330 323 aa14.08□□□□□ -0.15
SMARCA4-201ENST00000344626 LY6EQ16553 131 aa14.08□□□□□ -0.15
SMARCA4-201ENST00000344626 FAM222BQ8WU58 562 aa14.08□□□□□ -0.15
SMARCA4-201ENST00000344626 WDR89Q96FK6 387 aaPredicted RBP14.08□□□□□ -0.15
SMARCA4-201ENST00000344626 DHRS9Q9BPW9 319 aa14.08□□□□□ -0.15
SMARCA4-201ENST00000344626 Q9N2K0 584 aa14.08□□□□□ -0.15
SMARCA4-201ENST00000344626 FASNP49327 2511 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 KRBOX1C9JBD0 128 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 IL18BPO95998 194 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 VDAC1P21796 283 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 PPP1CCP36873 323 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 KCNMB1Q16558 191 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 LINC00114Q6XXX2 140 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 CADM3Q8N126 398 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 OR1L8Q8NGR8 309 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 GNG7O60262 68 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 FDX2Q6P4F2 183 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 TMED6Q8WW62 240 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 CHRDL1Q9BU40 450 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 A0A1B0GVG6 124 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 HBZP02008 142 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 TIMP3P35625 211 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 LINC01590Q5TEZ4 76 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 LIAT1Q6ZQX7 453 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 FAM219AQ8IW50 185 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 ZNF418Q8TF45 676 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 TXN2Q99757 166 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 TMEM231Q9H6L2 316 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 IDI2-AS1Q9NZ38 188 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 HEATR5BQ9P2D3 2071 aa14.08□□□□□ -0.16
SMARCA4-201ENST00000344626 IGHV2OR16-5A0A0B4J2B6 119 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 CST4P01036 141 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 HIST2H3PS2Q5TEC6 136 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 SEZ6L2Q6UXD5 910 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 LCN2P80188 198 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 DUSP18Q8NEJ0 188 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 PGLYRP3Q96LB9 341 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 RNF2Q99496 336 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 HSBP1L1C9JCN9 74 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 FCGR3AP08637 254 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 ENDOGQ14249 297 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 LILRB1Q8NHL6 650 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 PARP12Q9H0J9 701 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 GHITMQ9H3K2 345 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 G6PC2Q9NQR9 355 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 PTGDSP41222 190 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 ZNF788Q6ZQV5 615 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 ZFP82Q8N141 532 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 C14orf79Q96F83 325 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 SLC25A32Q9H2D1 315 aa14.07□□□□□ -0.16
SMARCA4-201ENST00000344626 ODAMA1E959 279 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 BCL2L11O43521 198 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 CNN1P51911 297 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 FNDC7Q5VTL7 733 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 SIRT4Q9Y6E7 314 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 CA7P43166 264 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 ECSCRQ19T08 205 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 ZCCHC24Q8N2G6 241 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 OR1L6Q8NGR2 347 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 OR5P3Q8WZ94 311 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 MEGF10Q96KG7 1140 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 TMEM106BQ9NUM4 274 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 KLF4O43474 513 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 SLC25A4P12235 298 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 C1orf100Q5SVJ3 147 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 RPUSD3Q6P087 351 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 C7orf69Q9H7B7 122 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 SLC45A2Q9UMX9 530 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 HTR1DP28221 377 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms