RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 KAAG1Q9UBP8 84 aa18.31■□□□□ 0.52
CACNB1-201ENST00000344140 LAMP3Q9UQV4 416 aa18.31■□□□□ 0.52
CACNB1-201ENST00000344140 KIAA2026Q5HYC2 2103 aa18.3■□□□□ 0.52
CACNB1-201ENST00000344140 DBX1A6NMT0 343 aa18.3■□□□□ 0.52
CACNB1-201ENST00000344140 COL8A2P25067 703 aa18.3■□□□□ 0.52
CACNB1-201ENST00000344140 S100GP29377 79 aa18.3■□□□□ 0.52
CACNB1-201ENST00000344140 H2BFSP57053 126 aa18.3■□□□□ 0.52
CACNB1-201ENST00000344140 UBTD1Q9HAC8 227 aa18.3■□□□□ 0.52
CACNB1-201ENST00000344140 SLC25A10Q9UBX3 287 aaPredicted RBP18.3■□□□□ 0.52
CACNB1-201ENST00000344140 TRGV10A0A0A0MS01 117 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 GZMKP49863 264 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 OR2T35Q8NGX2 323 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 SPOCK3Q9BQ16 436 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 USP9XQ93008 2570 aaPredicted RBP18.29■□□□□ 0.52
CACNB1-201ENST00000344140 MPPED1O15442 326 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 ADAM20O43506 726 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 ANKRD55Q3KP44 614 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 ZNF818PQ6ZRF7 136 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 LDLRAD3Q86YD5 345 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 HYLS1Q96M11 299 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 TMEM246Q9BRR3 403 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 SUCNR1Q9BXA5 334 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 OR2S2Q9NQN1 319 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 CCL28Q9NRJ3 127 aa18.29■□□□□ 0.52
CACNB1-201ENST00000344140 RBM7Q9Y580 266 aaKnown RBP18.29■□□□□ 0.52
CACNB1-201ENST00000344140 SMLR1H3BR10 107 aa18.28■□□□□ 0.52
CACNB1-201ENST00000344140 NDUFB3O43676 98 aa18.28■□□□□ 0.52
CACNB1-201ENST00000344140 RP2O75695 350 aa18.28■□□□□ 0.52
CACNB1-201ENST00000344140 SIX6O95475 246 aa18.28■□□□□ 0.52
CACNB1-201ENST00000344140 NDUFB7P17568 137 aa18.28■□□□□ 0.52
CACNB1-201ENST00000344140 NKX2-5P52952 324 aaPredicted RBP18.28■□□□□ 0.52
CACNB1-201ENST00000344140 LRRC10Q5BKY1 277 aa18.28■□□□□ 0.52
CACNB1-201ENST00000344140 LY6G6FQ5SQ64 297 aa18.28■□□□□ 0.52
CACNB1-201ENST00000344140 BVESQ8NE79 360 aa18.28■□□□□ 0.52
CACNB1-201ENST00000344140 OR52L2PQ8NGH6 319 aa18.28■□□□□ 0.52
CACNB1-201ENST00000344140 RAB18Q9NP72 206 aa18.28■□□□□ 0.52
CACNB1-201ENST00000344140 RAI1Q7Z5J4 1906 aaPredicted RBP18.27■□□□□ 0.52
CACNB1-201ENST00000344140 HSD17B6O14756 317 aa18.27■□□□□ 0.52
CACNB1-201ENST00000344140 CGB3P0DN86 165 aa18.27■□□□□ 0.52
CACNB1-201ENST00000344140 CGB7P0DN87 165 aa18.27■□□□□ 0.52
CACNB1-201ENST00000344140 DCAF12L2Q5VW00 463 aa18.27■□□□□ 0.52
CACNB1-201ENST00000344140 RFESDQ8TAC1 157 aa18.27■□□□□ 0.52
CACNB1-201ENST00000344140 CORO2AQ92828 525 aa18.27■□□□□ 0.52
CACNB1-201ENST00000344140 AKR1E2Q96JD6 320 aa18.27■□□□□ 0.52
CACNB1-201ENST00000344140 CALYQ9NYX4 217 aa18.27■□□□□ 0.52
CACNB1-201ENST00000344140 hADV38S2A0JD32 116 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 A1L4Q6 167 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 LYNX1G3V0Z9 82 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 F2RL2O00254 374 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 LYNX1P0DP58 116 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 MEF2CQ06413 473 aaPredicted RBP18.26■□□□□ 0.51
CACNB1-201ENST00000344140 FAM216AQ8WUB2 273 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 JPT1Q9UK76 154 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 KBTBD11-OT1A0A1B0GTJ5 212 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 RGS11O94810 467 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 OR5AC1P0C628 307 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 SRSF4Q08170 494 aaKnown RBP18.26■□□□□ 0.51
CACNB1-201ENST00000344140 LPAR3Q9UBY5 353 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 CLN8Q9UBY8 286 aa18.26■□□□□ 0.51
CACNB1-201ENST00000344140 IGHV2-70P01814 119 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 OR8U9P0C7N5 309 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 DAOP14920 347 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 DNASE1P24855 282 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 TMEM187Q14656 261 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 GNMTQ14749 295 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 LYPD2Q6UXB3 125 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 TBC1D26Q86UD7 250 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 OR8U1Q8NH10 309 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 PDCD10Q9BUL8 212 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 PARP12Q9H0J9 701 aaKnown RBP18.25■□□□□ 0.51
CACNB1-201ENST00000344140 UBE2J1Q9Y385 318 aaPredicted RBP18.25■□□□□ 0.51
CACNB1-201ENST00000344140 LINC00312Q9Y6C7 94 aa18.25■□□□□ 0.51
CACNB1-201ENST00000344140 C3orf85A0A1B0GTC6 90 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 MEX3AA1L020 520 aaKnown RBP18.24■□□□□ 0.51
CACNB1-201ENST00000344140 ZNF729A6NN14 1252 aaPredicted RBP18.24■□□□□ 0.51
CACNB1-201ENST00000344140 PPP1CCP36873 323 aaKnown RBP18.24■□□□□ 0.51
CACNB1-201ENST00000344140 SRPXP78539 464 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 TMEM30BQ3MIR4 351 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 GSG1LQ6UXU4 331 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 EDARADDQ8WWZ3 215 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 TIMD4Q96H15 378 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 LINC00574Q9H8X3 128 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 PRR13Q9NZ81 148 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 GNG12Q9UBI6 72 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 SPTAN1Q13813 2472 aaKnown RBP18.24■□□□□ 0.51
CACNB1-201ENST00000344140 HRNRQ86YZ3 2850 aaPredicted RBP18.24■□□□□ 0.51
CACNB1-201ENST00000344140 CCSO14618 274 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 PGLYRP1O75594 196 aaPredicted RBP18.24■□□□□ 0.51
CACNB1-201ENST00000344140 CLDN1O95832 211 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 C17orf58Q2M2W7 97 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 LIAT1Q6ZQX7 453 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 LRTM2Q8N967 370 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 DRAXINQ8NBI3 349 aaPredicted RBP18.24■□□□□ 0.51
CACNB1-201ENST00000344140 TAS2R3Q9NYW6 316 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 KCNS2Q9ULS6 477 aa18.24■□□□□ 0.51
CACNB1-201ENST00000344140 FAM25EA8MYX2 175 aa18.23■□□□□ 0.51
CACNB1-201ENST00000344140 DVL1O14640 695 aa18.23■□□□□ 0.51
CACNB1-201ENST00000344140 PHF1O43189 567 aaPredicted RBP18.23■□□□□ 0.51
CACNB1-201ENST00000344140 YPEL1O60688 119 aa18.23■□□□□ 0.51
CACNB1-201ENST00000344140 B3GALNT1O75752 331 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms